Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13184
- Subject:
- NR_146861.2
- Aligned Length:
- 2816
- Identities:
- 710
- Gaps:
- 2105
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTTCAGCTTTCACCGGCTGGGAGTCCGGAGCTGCAGCAGAGGCCACACCCAGGGCTTGGTGGTCCCGCGCT 74
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 75 TTCCGGAGCTCAGCAGGCGCTTGCTGCTTGAACCGGTCAAAGAAGGAACGAATGAATGACCCTTTTGCCAGGAT 148
Query 3 GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC 222
Query 77 CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC 296
Query 151 CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA 370
Query 225 GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC 444
Query 299 GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT 518
Query 373 TCTGTCTTTCAACGAGAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA 446
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCTGTCTTTCAACGACAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA 592
Query 447 ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA 666
Query 521 TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA 740
Query 595 CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG 814
Query 669 GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTC------------------------------- 711
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTCTAATGAGTAGCTCGAGAAATGTTCCGGGATG 888
Query 712 -------------------------------------------------------------------------- 711
Sbjct 889 GTGGATGAGCGATCATCCTTAAAAGAAAATGCTATTCTGGGAGCTCCAACCTGCAATTAACCTACAGAAGGAAC 962
Query 712 -------------------------------------------------------------------------- 711
Sbjct 963 CTTTTGAGAGGCTGGTGCAGCGCTTCGGGGAGGCAGATTAAGAACTGTAAGCAGCATAATACCTCCTTTGTGGC 1036
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1037 TTGAATTCCTTCGCTGTCTGGGGACCTAAGTCATTCAGAAGAGGTGGAGAAAAGATATTTTCAGATTGGCAGAA 1110
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1111 TGTGGGAGTTTTGAAATGAGAAAACCTGTTGTTAATTTGCATTTTGGAATAACTCTCAATTGATCTCTTTTCTG 1184
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1185 TTCCCCGCCCCCCTCTTGTTTCTCTTTAGGACCTAGAAACAGAAGTGAAGTTTGAAGTCTGCTCTCTGCAAAGA 1258
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1259 GGGTGGGAGTGGGTGGAGAAGAGGCTTGTTTTAAAAGCCAAAAACAGAAAGTAAAAAGAAATGGGAAAGTAAAA 1332
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1333 CCAAAGCAGCAAGTGACTCTCTTCTGATGTGCACTTTTCATTTTTCTCCCCCACATTTCAGTGTTAGAAAGAAA 1406
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1407 ACGAGAGGAGCTAGGGAAAGAAGGAGTTGGGGACAGAAGACTAAGATTTCAACGTGAAATTCCATTTACAAAGG 1480
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1481 CTTTACTGCAAACAATAGCTAATTTAGTCCTGTAAACATGCATTTATCATACATTTTAATTTTAATATTAAAAA 1554
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1555 TACTGCATGTAAATGTTCTGAACTAAAGGTAGATAGCAATATGTAGTTTGCCATAAAATGAATGCATGTCTTAT 1628
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1629 TCTTTTCCATAGTTCTTCATTAATGAGACTTGTAGTCAAGAATAGATTGAAGATACCATTCTCCTTGTGTAGTT 1702
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1703 CAAAAAAATCTCCTCTGGTAATACTGAAACAACTAATTTTTCTTATTTTGTTTGTTCCTCTTTATTATTAAATA 1776
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1777 CTATGTGAATTAACTCTTTAGTAGTTGGCCTGGTTGAAGCTCTGTGAGGAGCAAAGCAGCCCTCTCCAGGTGAA 1850
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1851 CTGCTTGACTTTACCACCTGAAGGAGTATTTACTGCAAGAATTAACAAAGCAGACTGCAGTGCAACGGCACGAT 1924
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1925 CTTGGCTCACCACAACCTCTACCTCCAGGGTTCAAGCGATGCTCCTACCTCAGCCTCCTCAGTAGCTGGGATTA 1998
Query 712 -------------------------------------------------------------------------- 711
Sbjct 1999 CAGGCATGTGCCATCACCCCGGCTAATTCTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGCTGG 2072
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2073 TCTTGAACTCCCAACCTCAGGTGATCCTCCTGCCTCCGCCTCCCAAAGTGCTGGGATTACAGGTGTTCCTGATC 2146
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2147 CAAGCAGAACCCTGTTATTTGAAGAGCCTGAGAAATCTTATCCCGTTTACAAATGTCCTGGGAGTGCATCCAAA 2220
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2221 GTGAAACTTGGGCATCCTCAATACTAAGAAATCTCTGAGAATGACTGGATCTTGGCTCTTTGATCTTACCTCTA 2294
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2295 CTCCTCTGAAAAACATGATTATCTAAAATTGTGTTAGGTGGATGAACCGCATCAAAGACTTCCAGAAGCCACTC 2368
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2369 CAGTGACCATAAGATAAATGTCAGAATCGCATAACCCCCAGGATCAGCCTGTTGCTCAGGCTGGAGTGCAATGG 2442
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2443 CACGATCTGAGCTCACTGCAACCACCTGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCT 2516
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2517 GGGATTACAGGCGCCTGCAACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTGCCATGTTGG 2590
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2591 CCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCT 2664
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2665 TGAGCCACCGAGCCTGGCCTCTACTTTTTATTACTGTCATGTAGTTAGTGATAAAATGCTTCTATCTGAAAAAA 2738
Query 712 -------------------------------------------------------------------------- 711
Sbjct 2739 AATTTGTTGTTCTAAATTCTAAAAAATTCTCGTGATTATTGCTTAAATTTTAATAAAGCAGATGTGATTTTCAA 2812
Query 712 ---- 711
Sbjct 2813 ATTA 2816
