Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_13218
• Subject: XM_011542614.1
• Aligned Length: 1482
• Identities: 878
• Gaps: 594

Alignment

Query    1  ATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGCG  74
                                                                                 .||..
Sbjct    1  ---------------------------------------------------------------------ATGGA  5

Query   75  GAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTG  148
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    6  CAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTG  79

Query  149  TCCAAGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGTCTGGACAAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   80  TCCAAGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGTCTGGACAAC  153

Query  223  ATCACACAGGTCATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  154  ATCACACAGGTCATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT  227

Query  297  GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAATGGCTGCAGCTAGACATCAGTGTTCTTACT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  228  GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAATGGCTGCAGCTAGACATCAGTGTTCTTACT  301

Query  371  TAATAAACATGCATGTGGATGAATTTTTAAAGACTGGAGGTATTGCTGAGTGGTTGAATGGTTTGGAATATGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  302  TAATAAACATGCATGTGGATGAATTTTTAAAGACTGGAGGTATTGCTGAGTGGTTGAATGGTTTGGAATATGTG  375

Query  445  CCACAAAGACTGAAAAATCTTAATGAAATTAATAAGCTGCTAGCACATCGACCTTGGCTGATCACAAAAGAGCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  376  CCACAAAGACTGAAAAATCTTAATGAAATTAATAAGCTGCTAGCACATCGACCTTGGCTGATCACAAAAGAGCA  449

Query  519  CATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  450  CATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG  523

Query  593  CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  524  CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT  597

Query  667  GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  598  GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC  671

Query  741  TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  672  TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC  745

Query  815  TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  746  TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA  819

Query  889  AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAGGTGCTTTTTTG--------------  948
            |||||||||||||||||||||||||||||||||||||||||||||||||     .|||||              
Sbjct  820  AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAG-----ATTTTGAGGATGACATGATT  888

Query  949  ----CACTTTTTTGCCTTT-------------------------------------------------------  963
                || |.|..||.||.|                                                       
Sbjct  889  ATAACA-TCTGATGTCTCTCGATATATTGAAGACCCTGGTTTTGGGTATGAAGACTTTGCCAGACGAGGAGAAG  961

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct  962  AGCATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCATGGGTTCTCCCTGGTGAACAGACTTTAT  1035

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1036  TCTGACATTGGACATCTTCTTGATGAAAAGTTTCGGATGGTCTACAATCTCACATATAACACTATGGCCACCCA  1109

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1110  TGAGGATGTTGACACAACCATGCTGCGCAGAGCTTTATTTAACTATGTTCACTGTATGTTTGGAATCAGGTATG  1183

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1184  ATGACTATGATTATGGAGAAGTTAATCAATTACTTGAAAGAAGCCTGAAGGTTTACATTAAGACAGTGACCTGC  1257

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1258  TATCCTGAGAGAACTACAAAACGCATGTATGATAGTTACTGGCGGCAGTTCAAACACTCAGAAAAAGTTCATGT  1331

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1332  CAATCTACTTTTAATGGAAGCACGAATGCAAGCTGAACTTCTTTATGCTCTTCGTGCCATAACTCGGCATTTGA  1405

Query  964  --  963
              
Sbjct 1406  CC  1407