Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13274
- Subject:
- NR_024523.1
- Aligned Length:
- 2697
- Identities:
- 679
- Gaps:
- 1986
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCTGGGCTGCGCCATTGTTGGGGGAGGGGCGGCTGCTGAGGGCGGCGAGTAGGGGGCTAGAGAAGGCGCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCGGCCCAGAGGAGCAGAGACGCCCCATGGGGAACACGCTGACCTATTGCGTGTCCCCCCAGTACCAGCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTGGGCCGGTGCGTGGTGCCAGAGCTGTACTGCGCAACCGACATCTACGAGGCGGCACCCGGGGATGCGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGGTAGCGCCCGCTTCTGTGGAGCCTACCAGTTGGATTTCGCAGCGGGCGAGGGCCACCACCTGCAGCACAT 296
Query 1 -------------ATGCCCGAAGATTTAGCTTTGGAGTCAAACCCTTCTGACCATCCAAGGGCAAGCACAATTT 61
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 297 CAGCGACCACGAGATGCCCTAAGATTTAGCTTTGGAGTCAAACCCTTCTGACCATCCAAGGGCAAGCACAAGTT 370
Query 62 TCCTGAGCAAATCTCAAACGGATGTGCGAGAAAAGAGGAAGAGCAACCATTTGAACCAT--------------- 120
|||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||.|||
Sbjct 371 TCCTGAGCAAATCTCAAACCGATGTGCGAGACAAGAGGAAGAGCAACCACTTAAATCATCTATCTCCAGGGCAG 444
Query 121 -------------------------------------------------------------------------- 120
Sbjct 445 CTTACTAAAAAGTATAGCTCATGCTCAACAATATTTCTAGGTGACAGAACAGTCAGCCAGCCTAACCTTAGAAC 518
Query 121 ----------TGTGACCTTAGCAATATATTACCACATAAAGAACAG---------------------------- 156
|||||||||||.||||||||||||||||||||||||
Sbjct 519 CACAGTAAAATGTGACCTTAGAAATATATTACCACATAAAGAACAGAGATGCAAACAGATCCCTGGATATTTTT 592
Query 157 ------------------------CGAGAAAAAGTTCCAGAGGAATACTTTAAGCATGATCCTGAGCACAAATT 206
|||||||||||||||.|||||||.||||||||||||||||||||||||||
Sbjct 593 GATGAGAGATCACATCCCCTCACACGAGAAAAAGTTCCACAGGAATAGTTTAAGCATGATCCTGAGCACAAATT 666
Query 207 TATTTACAGATTTGTTCGTACTCTTTTTAGTGCTGCACAGCTAACAGCTGAATGTGCAATAGTAACTTTGGTTT 280
|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||.||||||
Sbjct 667 TATTTACAGATTTGTTCATACTCTTTTTAGTGCTGCACAGCTAACAGCTGAATGTGCAACAGTAACTCTGGTTT 740
Query 281 ACTTAGAAAGGCTTTTAACTTATGCTGAAATCGACATTTGTCCCACCAACTGGAAAAGGATTGTTCTGGGAGCC 354
||||||||||||||||||||||||||||||||||||||||.|||||.||||.||||||||||||||||||||||
Sbjct 741 ACTTAGAAAGGCTTTTAACTTATGCTGAAATCGACATTTGCCCCACTAACTAGAAAAGGATTGTTCTGGGAGCC 814
Query 355 ATTCTTCTTGCCTCCAAGGTTTGGGACGATCAGGCTGTATGGAATGTGGACTACTGCCAGATCCTCAAGGACAT 428
|.||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACTCTTCTTGCCTCCAAGGTTTGGGATGATCAGGCTGTATGGAATGTGGACTACTGCCAGATCCTCAAGGACAT 888
Query 429 TACAGTTGAGGACATGAATGAAATGGAAAGGCATTTTCTGGAGCTTCTTCAGTTTAATATTAATGTTCCTGCCA 502
|||||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||.|
Sbjct 889 TACAGTTGAGGACATGAATGAAATGGAAAGGCATTTTTCGGAGCTTCTTCAGTTTAATATTAATGTTCCTGCTA 962
Query 503 GTGTTTATGCCAAATACTACTTTGACCTTCGCTCCTTAGCAGATGACAACAACCTGAATTTTCTATTTGCTCCT 576
||||||||||||||.|||||.||||||.||||||||||||||||| ||.|||||||||||||||||||||||
Sbjct 963 GTGTTTATGCCAAACACTACCTTGACCATCGCTCCTTAGCAGATG---ACCACCTGAATTTTCTATTTGCTCCT 1033
Query 577 CTTAGCAAAGAAAGAGCACAGAACCTAGAGGCTATTTCTAGATTGTGTGAAGACAAAGACTTGTGTAGAGCCGC 650
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||.||
Sbjct 1034 CTTAGCAAAGAAAGAGCACAGAACCTAGAGGCTATTTCTAGATTATGTGAAGACAAAGACTTGTGTGGAGCAGC 1107
Query 651 TATGAGAAGGTCTTTCAGTGCTGAT-AACTTCATTGGTATTCAGCGCTCTAAAGCCATCCTCTCT--------- 714
|.|.||||||||||||||.|||||| |||||||||||||||||||.|||||||||||||||||||
Sbjct 1108 TGTAAGAAGGTCTTTCAGCGCTGATCAACTTCATTGGTATTCAGCACTCTAAAGCCATCCTCTCTTAAAGGGAG 1181
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1182 AAATGAGGGGTTATAATGTCACGGGACCTTCATCTACAAAGACTGGAGAAATACCACCTTTCCTGCTCAAAAAC 1255
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1256 CAGCAAAATTAGTGTTTTCATCAAAAGGAAAGATCTCAAATTCAAGAGACGCACGGACAACAAGGATCATACTC 1329
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1330 CATAGAAAAGAATGGGACCTTGTCAATGCAACAAAACACTCTTCTGTCCTTTTTAATGTAAACAGAGTCACCAA 1403
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1404 AACCACTCCAAAGTGAAGGCTCCCATCCCACACACAGATATTTGCTTACAATGTGGGCCAGTAACTGAACTATG 1477
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1478 TTAGGTTTTTTAAACAATAGTTTAAATTTTTAGACTTTAAAGACATTAACCATATAACTTTTATGTTTCTTCCA 1551
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1552 GTTTTTCTCCCCCTGCTCATTTTGCTGCATATGCCTTTAGAATCAATGCAGTATTGCCCTTAAAACAAGGGACT 1625
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1626 CTAACTAAAGCCACTTAGGAGCAGACTGCAGCATTGTTAGGTATTGAAGGGTTCTTCCTCCCTACTGTTACCAT 1699
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1700 TAAAGCTGCTAGTCATTGGCAATCATTTTAAACCAAAAAGCTGATGGATAACATTTGTCATTCATATTCTTTGC 1773
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1774 AAGCATTACTTTAGCATTTTAGCATGTCTGCGGTCATAAACAAAGGAAGTATCAGTTATGATATCTACTTCTAT 1847
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1848 TGGGGTCCATGTTGCATTTCTTGTGAACTATAAATGGTACTTCTCATTTTCTGATAATTTTTATCTTATTAAAT 1921
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1922 AAATGTATTAAAAGATATTTTCATAATGCCAATGAACATGGTGGTTCAGTGACAGTGAAAAAAAAGTAAAGCAG 1995
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1996 TTTTAAGCTTTAATATAGTTTGGGCCCTCCAAGGTACTGCAGCAGGAGTATAAATGCTATAAACCTTTGAAAAA 2069
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2070 CATCATTTGAGAGTTTTGTTTTTTTTCTTTAAGAGATGGGGGTCTTGCTGTGTTGTCCAGGCTGGAGTATGGTG 2143
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2144 GCTGTTCACCAGTGCAGTCATGGTGCACTGCAGCCTAGAACTTCCTGGCTTCGCGCCATCCTCTAGCCTCGGCC 2217
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2218 ACACGAGTGGCTGGGACTGCAGGCGCACCCTGCATTTGTCTCCTGAATGTTAGGCTTTTGATTTTTTGTTTCAG 2291
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2292 TCACTCTTGAAGTCACTCTTGACTGAAGCAAAAAATTAAAAGCTTTATATTCAAAATTCTCAAAATGAAGCTGG 2365
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2366 GTGTGGTGGTGCACACCTGAGGTTCCAGCTACTTGGGTGGCTGGAGGATTGCTTGGGGTCAGGTATTGGAGGCT 2439
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2440 GCAGTGTATCGTGATGGTGCCTATAGAAATAGCTACTGCACTTCAACCTGGACAACATATCGGGACCCCATCTC 2513
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2514 TTAGAAAAATGCAAAATTAAATGCAAAAGAAATGCACCGGGCATAGTGATTCATGCCTATAATCTCAGTACTTT 2587
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2588 GGGAGGCTGAGGTGGGAGGATTACTTGAGCGCAGCAGTTCAAGACCAGTCTAGTCAACACAGTGAGCCCCTGTC 2661
Query 715 --------------------------------- 714
Sbjct 2662 TGTAAAAAATAATAATAAATAAAAATAATTAGC 2694
