Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13280
Subject:
XM_006505851.3
Aligned Length:
1666
Identities:
1331
Gaps:
218

Alignment

Query    1  ATGTCTCTCGGCGGAGCCTCCGAGCGCAGCGTCCCGGCCACCAAGATTGAAATTACCGTGTCCTGCCGGAACCT  74
                                                      |.|.||            |.||...||||.||
Sbjct    1  ------------------------------------------ATGCTT------------TTCTCTAGGAATCT  20

Query   75  GCTAGACCTTGATACCTTCTCCAAGTCCGACCCCATGGTGGTGCTTTACACGCAGAGCCGGGCCAGCCAGGAGT  148
            |||||||||.|||||.|||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct   21  GCTAGACCTGGATACATTCTCCAAGTCGGACCCCATGGTGGTGCTTCACACGCAGAGCCGGGCCAGCCAGGAGT  94

Query  149  GGCGGGAGTTCGGACGGACCGAGGTGATTGATAACACGCTGAACCCAGACTTCGTGCGCAAATTCGTCCTCGAC  222
            ||||||||||||||||.||||||||||||||.|||||.|||||.|||||||||||||||||||||||.||||||
Sbjct   95  GGCGGGAGTTCGGACGAACCGAGGTGATTGACAACACACTGAATCCAGACTTCGTGCGCAAATTCGTTCTCGAC  168

Query  223  TATTTCTTTGAGGAAAAGCAAAATCTGCGCTTCGATGTGTACAACGTGGACTCCAAAACCAACATCTCCAAACC  296
            ||||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||.||||.|||||||||||
Sbjct  169  TATTTCTTTGAGGAAAAGCAAAATCTCCGCTTCGATGTGTACAACGTCGACTCTAAAGCCAATATCTCCAAACC  242

Query  297  GAAGGATTTCCTGGGACAAGCGTTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGAGTAGAGCGAA  370
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||.
Sbjct  243  GAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTGGAGCGAC  316

Query  371  CCCTCACGGGTGTACCAGGCAAGAAGTGTGGGACCATATTGCTGACTGCAGAAGAGCTTAGCAATTGTCGGGAC  444
            |.||.||||||||.|||||.||||||||||||||||||.|||||||.||.||.|||||.|||||.||..|||||
Sbjct  317  CTCTTACGGGTGTGCCAGGAAAGAAGTGTGGGACCATACTGCTGACCGCCGAGGAGCTGAGCAACTGCAGGGAC  390

Query  445  ATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACAAGAAGGACTTCTTTGGGAAATCAGACCCCTTCCTTGT  518
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||
Sbjct  391  ATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACAAAAAGGACTTCTTTGGGAAGTCAGACCCTTTCCTTGT  464

Query  519  GTTCTACAGGAGCAATGAGGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACGCTGAATC  592
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct  465  GTTCTACAGGAGCAATGAAGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACACTGAACC  538

Query  593  CTGTGTGGCAGCCCTTCAGCATCCCTGTGCGGGCTCTGTGCAATGGAGACTATGACAGAACGGTGAAGATTGAT  666
            |.||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.||.
Sbjct  539  CAGTATGGCAGCCCTTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGACTATGACAGAACAGTGAAGATCGAC  612

Query  667  GTGTACGACTGGGACCGGGATGGAAGCCACGATTTCATTGGTGAGTTCACCACCAGCTACCGGGAGCTGAGCAA  740
            ||.||.|||||||||||.||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||
Sbjct  613  GTATATGACTGGGACCGAGATGGAAGCCACGACTTCATTGGCGAGTTCACAACCAGCTACCGGGAGCTGAGCAA  686

Query  741  GGCCCAGAACCAGTTCACAGTATATGAGGTTCTTAACCCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACT  814
            |||||||||.|||||||||||.||.|||||.||||||||||||||||||||.|||||||||||||||..|||||
Sbjct  687  GGCCCAGAATCAGTTCACAGTGTACGAGGTACTTAACCCTCGGAAGAAATGCAAGAAGAAGAAATATACCAACT  760

Query  815  CAGGAACTGTGACGCTGCTCTCCTTCTCTGTGGACTCTGAATTCACTTTTGTTGATTACATCAAGGGAGGGACA  888
            |.||.||.||||||||.||.|||||||||||||||||.||||||||||||||.|||||||||||||||||||||
Sbjct  761  CGGGGACCGTGACGCTCCTTTCCTTCTCTGTGGACTCAGAATTCACTTTTGTGGATTACATCAAGGGAGGGACA  834

Query  889  CAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTTCCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTA  962
            ||||||||||||||.|||||.|||||||||||.|||||||||||||||||.|||||||||||.||.||||||||
Sbjct  835  CAGCTGAACTTCACCGTAGCTATTGACTTCACTGCTTCCAATGGGAATCCCCTGCAGCCTACGTCGCTGCACTA  908

Query  963  CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACA  1036
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  909  CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTACGACA  982

Query 1037  GTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAAGCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCC  1110
            ||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  983  GTGACAAGCTCTTCCCAGCCTATGGTTTTGGGGCCAAGCTGCCCCCAGAGGGGCGGATCTCCCACCAGTTCCCC  1056

Query 1111  CTGAACAACAATGATGAGGACCCCAACTGTGCGGGCATCGAGGGTGTGCTGGAGAGCTATTTCCAGAGCCTGCG  1184
            ||||||||.||.|||||.||||||||||||||.|||||.|||||||||||.|||||.||.||||||||.|||||
Sbjct 1057  CTGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCG  1130

Query 1185  CACAGTGCAGCTCTATGGGCCCACCTACTTTGCTCCTGTCATCAACCAAGTGGCCAGGGCTGCAGCCAAGATCT  1258
            ||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.||||
Sbjct 1131  CACAGTGCAGCTCTATGGGCCCACTTACTTTGCACCTGTCATCAACCAGGTGGCCAGGGCTGCAGCCAAAATCT  1204

Query 1259  CTGATGGCTCCCAGTACTATGTTCTGCTCATCATCACTGATGGGGTCATCTCTGACATGACGCAGACCAAGGAG  1332
            |.|||||.|||||||||||.|||||||||||.||||||||.||.||||||||.||||||||.||||||||.|||
Sbjct 1205  CGGATGGTTCCCAGTACTACGTTCTGCTCATTATCACTGACGGCGTCATCTCCGACATGACACAGACCAAAGAG  1278

Query 1333  GCCATCGTCAGCGCCTCCTCATTGCCCATGTCTATCATTATCGTCGGTGTAGGACCAGCCATGTTTGAGGCAAT  1406
            |||||||||||.|||||||||.|||||||||||||||||||.|||||.||.|||||.|||||||||||||||||
Sbjct 1279  GCCATCGTCAGTGCCTCCTCACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGCAAT  1352

Query 1407  GGAAGAGTTGGACGGTGATGATGTGCGCGTGTCCTCTAGGGGACGCTACGCAGAGCGGGACATCGTTCAG----  1476
            |||||||.||||.|||||||||||.||.||.|||||.|||||||||||.|||||||||||||||||||||    
Sbjct 1353  GGAAGAGCTGGATGGTGATGATGTACGTGTATCCTCCAGGGGACGCTATGCAGAGCGGGACATCGTTCAGTTTG  1426

Query 1477  ---------GA-------------------------AGGTTGCTGCAGCCTTGGCACATCCG--TGG-------  1507
                     ||                         ||| ||||| || |.||||    |||  |||       
Sbjct 1427  TCCCATTCCGAGATTATGTTGACCGATCGGGGAACCAGG-TGCTG-AG-CATGGC----CCGACTGGCCAAGGA  1493

Query 1508  TG------------------------------------------------------------------------  1509
            ||                                                                        
Sbjct 1494  TGTACTAGCTGAGATTCCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCC  1567

Query 1510  --------------------------------------  1509
                                                  
Sbjct 1568  CTGCGAGCCCCAACCCAACCCCAGCCCCAGAACAGCCC  1605

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