Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13280
- Subject:
- XM_006505852.3
- Aligned Length:
- 1666
- Identities:
- 969
- Gaps:
- 617
Alignment
Query 1 ATGTCTCTCGGCGGAGCCTCCGAGCGCAGCGTCCCGGCCACCAAGATTGAAATTACCGTGTCCTGCCGGAACCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTAGACCTTGATACCTTCTCCAAGTCCGACCCCATGGTGGTGCTTTACACGCAGAGCCGGGCCAGCCAGGAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGCGGGAGTTCGGACGGACCGAGGTGATTGATAACACGCTGAACCCAGACTTCGTGCGCAAATTCGTCCTCGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TATTTCTTTGAGGAAAAGCAAAATCTGCGCTTCGATGTGTACAACGTGGACTCCAAAACCAACATCTCCAAACC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGGATTTCCTGGGACAAGCGTTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGAGTAGAGCGAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCCTCACGGGTGTACCAGGCAAGAAGTGTGGGACCATATTGCTGACTGCAGAAGAGCTTAGCAATTGTCGGGAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACAAGAAGGACTTCTTTGGGAAATCAGACCCCTTCCTTGT 518
|||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||
Sbjct 1 ---------ATGCAGCTGTGTGCAAACAAGCTGGACAAAAAGGACTTCTTTGGGAAGTCAGACCCTTTCCTTGT 65
Query 519 GTTCTACAGGAGCAATGAGGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACGCTGAATC 592
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 66 GTTCTACAGGAGCAATGAAGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACACTGAACC 139
Query 593 CTGTGTGGCAGCCCTTCAGCATCCCTGTGCGGGCTCTGTGCAATGGAGACTATGACAGAACGGTGAAGATTGAT 666
|.||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.||.
Sbjct 140 CAGTATGGCAGCCCTTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGACTATGACAGAACAGTGAAGATCGAC 213
Query 667 GTGTACGACTGGGACCGGGATGGAAGCCACGATTTCATTGGTGAGTTCACCACCAGCTACCGGGAGCTGAGCAA 740
||.||.|||||||||||.||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||
Sbjct 214 GTATATGACTGGGACCGAGATGGAAGCCACGACTTCATTGGCGAGTTCACAACCAGCTACCGGGAGCTGAGCAA 287
Query 741 GGCCCAGAACCAGTTCACAGTATATGAGGTTCTTAACCCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACT 814
|||||||||.|||||||||||.||.|||||.||||||||||||||||||||.|||||||||||||||..|||||
Sbjct 288 GGCCCAGAATCAGTTCACAGTGTACGAGGTACTTAACCCTCGGAAGAAATGCAAGAAGAAGAAATATACCAACT 361
Query 815 CAGGAACTGTGACGCTGCTCTCCTTCTCTGTGGACTCTGAATTCACTTTTGTTGATTACATCAAGGGAGGGACA 888
|.||.||.||||||||.||.|||||||||||||||||.||||||||||||||.|||||||||||||||||||||
Sbjct 362 CGGGGACCGTGACGCTCCTTTCCTTCTCTGTGGACTCAGAATTCACTTTTGTGGATTACATCAAGGGAGGGACA 435
Query 889 CAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTTCCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTA 962
||||||||||||||.|||||.|||||||||||.|||||||||||||||||.|||||||||||.||.||||||||
Sbjct 436 CAGCTGAACTTCACCGTAGCTATTGACTTCACTGCTTCCAATGGGAATCCCCTGCAGCCTACGTCGCTGCACTA 509
Query 963 CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACA 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 510 CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTACGACA 583
Query 1037 GTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAAGCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCC 1110
||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 584 GTGACAAGCTCTTCCCAGCCTATGGTTTTGGGGCCAAGCTGCCCCCAGAGGGGCGGATCTCCCACCAGTTCCCC 657
Query 1111 CTGAACAACAATGATGAGGACCCCAACTGTGCGGGCATCGAGGGTGTGCTGGAGAGCTATTTCCAGAGCCTGCG 1184
||||||||.||.|||||.||||||||||||||.|||||.|||||||||||.|||||.||.||||||||.|||||
Sbjct 658 CTGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCG 731
Query 1185 CACAGTGCAGCTCTATGGGCCCACCTACTTTGCTCCTGTCATCAACCAAGTGGCCAGGGCTGCAGCCAAGATCT 1258
||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.||||
Sbjct 732 CACAGTGCAGCTCTATGGGCCCACTTACTTTGCACCTGTCATCAACCAGGTGGCCAGGGCTGCAGCCAAAATCT 805
Query 1259 CTGATGGCTCCCAGTACTATGTTCTGCTCATCATCACTGATGGGGTCATCTCTGACATGACGCAGACCAAGGAG 1332
|.|||||.|||||||||||.|||||||||||.||||||||.||.||||||||.||||||||.||||||||.|||
Sbjct 806 CGGATGGTTCCCAGTACTACGTTCTGCTCATTATCACTGACGGCGTCATCTCCGACATGACACAGACCAAAGAG 879
Query 1333 GCCATCGTCAGCGCCTCCTCATTGCCCATGTCTATCATTATCGTCGGTGTAGGACCAGCCATGTTTGAGGCAAT 1406
|||||||||||.|||||||||.|||||||||||||||||||.|||||.||.|||||.|||||||||||||||||
Sbjct 880 GCCATCGTCAGTGCCTCCTCACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGCAAT 953
Query 1407 GGAAGAGTTGGACGGTGATGATGTGCGCGTGTCCTCTAGGGGACGCTACGCAGAGCGGGACATCGTTCAG---- 1476
|||||||.||||.|||||||||||.||.||.|||||.|||||||||||.|||||||||||||||||||||
Sbjct 954 GGAAGAGCTGGATGGTGATGATGTACGTGTATCCTCCAGGGGACGCTATGCAGAGCGGGACATCGTTCAGTTTG 1027
Query 1477 ---------GA-------------------------AGGTTGCTGCAGCCTTGGCACATCCG--TGG------- 1507
|| ||| ||||| || |.|||| ||| |||
Sbjct 1028 TCCCATTCCGAGATTATGTTGACCGATCGGGGAACCAGG-TGCTG-AG-CATGGC----CCGACTGGCCAAGGA 1094
Query 1508 TG------------------------------------------------------------------------ 1509
||
Sbjct 1095 TGTACTAGCTGAGATTCCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCC 1168
Query 1510 -------------------------------------- 1509
Sbjct 1169 CTGCGAGCCCCAACCCAACCCCAGCCCCAGAACAGCCC 1206
