Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13280
- Subject:
- XM_011533388.2
- Aligned Length:
- 1867
- Identities:
- 1099
- Gaps:
- 752
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACAGGGCGAGTAGCTGGTGGGATCGAGAAGCGGGGGGTCTTGGGCAGCCCCACCCCGAAAAAAGGGCTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCGGGTTCAGGGGGTGGGTCGCAGATATCCGGTAGGAGCTCGGCCCCAGGAGGACAAAGTTCTGGGGCGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTCTTTCCTGGGCCCTTGGAGACAGTGTGGGTGCGTTCGCGTCCAGTCCGCAGAGCCATGGTTCCTGGACAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATTTCCGGTGCTGTCCAGAGTGCTGACAGAGCGGACCCCGGCTGGGGGTAGCCATGGGGGACAGAGGTTCGA 296
Query 1 ----------ATGTCTCTCGGCGGAGC----CTCCGAG------CGCAGCGTCCCGGCCACCAAGATTGAAATT 54
|||.|||||..|.|.|| |||.||| ||..||| ..|||.|.|||.|| ||| |
Sbjct 297 TGCGGGCCCCATGCCTCTCCTCAGTGCCCGGCTCAGAGCCGACTCGAGGCG-GGCGGACTCCAGGA-TGA---T 365
Query 55 --ACCGTGTCCTGCC---------------GGAACCTGCTAGACCTTGATACCTTCTCCAAGTCCGACCCCATG 111
||..||| |||.| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 CCACTCTGT-CTGTCTGTTGCTTTTCTCTAGGAACCTGCTAGACCTTGATACCTTCTCCAAGTCCGACCCCATG 438
Query 112 GTGGTGCTTTACACGCAGAGCCGGGCCAGCCAGGAGTGGCGGGAGTTCGGACGGACCGAGGTGATTGATAACAC 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 GTGGTGCTTTACACGCAGAGCCGGGCCAGCCAGGAGTGGCGGGAGTTCGGACGGACCGAGGTGATTGATAACAC 512
Query 186 GCTGAACCCAGACTTCGTGCGCAAATTCGTCCTCGACTATTTCTTTGAGGAAAAGCAAAATCTGCGCTTCGATG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GCTGAACCCAGACTTCGTGCGCAAATTCGTCCTCGACTATTTCTTTGAGGAAAAGCAAAATCTGCGCTTCGATG 586
Query 260 TGTACAACGTGGACTCCAAAACCAACATCTCCAAACCGAAGGATTTCCTGGGACAAGCGTTCCTGGCCCTGGGA 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TGTACAACGTGGACTCCAAAACCAACATCTCCAAACCGAAGGATTTCCTGGGACAAGCGTTCCTGGCCCTGGGA 660
Query 334 GAGGTGATTGGAGGCCAGGGCAGCCGAGTAGAGCGAACCCTCACGGGTGTACCAGGCAAGAAGTGTGGGACCAT 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GAGGTGATTGGAGGCCAGGGCAGCCGAGTAGAGCGAACCCTCACGGGTGTACCAGGCAAGAAGTGTGGGACCAT 734
Query 408 ATTGCTGACTGCAGAAGAGCTTAGCAATTGTCGGGACATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 ATTGCTGACTGCAGAAGAGCTTAGCAATTGTCGGGACATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACA 808
Query 482 AGAAGGACTTCTTTGGGAAATCAGACCCCTTCCTTGTGTTCTACAGGAGCAATGAGGATGGCACGTTCACCATC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AGAAGGACTTCTTTGGGAAATCAGACCCCTTCCTTGTGTTCTACAGGAGCAATGAGGATGGCACGTTCACCATC 882
Query 556 TGCCACAAGACAGAGGTTGTGAAAAACACGCTGAATCCTGTGTGGCAGCCCTTCAGCATCCCTGTGCGGGCTCT 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 TGCCACAAGACAGAGGTTGTGAAAAACACGCTGAATCCTGTGTGGCAGCCCTTCAGCATCCCTGTGCGGGCTCT 956
Query 630 GTGCAATGGAGACTATGACAGAACGGTGAAGATTGATGTGTACGACTGGGACCGGGATGGAAGCCACGATTTCA 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 GTGCAATGGAGACTATGACAGAACGGTGAAGATTGATGTGTACGACTGGGACCGGGATGGAAGCCACGATTTCA 1030
Query 704 TTGGTGAGTTCACCACCAGCTACCGGGAGCTGAGCAAGGCCCAGAACCAGTTCACAGTATATGAGGTTCTTAAC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TTGGTGAGTTCACCACCAGCTACCGGGAGCTGAGCAAGGCCCAGAACCAGTTCACAGTATATGAGGTTCTTAAC 1104
Query 778 CCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACTCAGGAACTGTGACGCTGCTCTCCTTCTCTGTGGACTC 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 CCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACTCAGGAACTGTGACGCTGCTCTCCTTCTCTGTGGACTC 1178
Query 852 TGAATTCACTTTTGTTGATTACATCAAGGGAGGGACACAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTT 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 TGAATTCACTTTTGTTGATTACATCAAGGGAGGGACACAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTT 1252
Query 926 CCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTACATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCC 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 CCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTACATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCC 1326
Query 1000 CTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACAGTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAA 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 CTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACAGTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAA 1400
Query 1074 GCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCCCT-------------------------GAACAACAAT 1122
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1401 GCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCCCTGCCTGGCAGGGCATATTCTTTGACAGAACAACAA- 1473
Query 1123 GATGAGGACCCCAACTGTGCGGGCATCGAGGGTGTGCTGGAGAGCTATTTCCAGAGCCTGCGCACAGTGCAGCT 1196
Sbjct 1474 -------------------------------------------------------------------------- 1473
Query 1197 CTATGGGCCCACCTACTTTGCTCCTGTCATCAACCAAGTGGCCAGGGCTGCAGCCAAGATCTCTGATGGCTCCC 1270
Sbjct 1474 -------------------------------------------------------------------------- 1473
Query 1271 AGTACTATGTTCTGCTCATCATCACTGATGGGGTCATCTCTGACATGACGCAGACCAAGGAGGCCATCGTCAGC 1344
Sbjct 1474 -------------------------------------------------------------------------- 1473
Query 1345 GCCTCCTCATTGCCCATGTCTATCATTATCGTCGGTGTAGGACCAGCCATGTTTGAGGCAATGGAAGAGTTGGA 1418
Sbjct 1474 -------------------------------------------------------------------------- 1473
Query 1419 CGGTGATGATGTGCGCGTGTCCTCTAGGGGACGCTACGCAGAGCGGGACATCGTTCAGGAAGGTTGCTGCAGCC 1492
Sbjct 1474 -------------------------------------------------------------------------- 1473
Query 1493 TTGGCACATCCGTGGTG 1509
Sbjct 1474 ----------------- 1473
