Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13280
- Subject:
- XM_017005747.1
- Aligned Length:
- 1661
- Identities:
- 676
- Gaps:
- 979
Alignment
Query 1 ATGTCTCTCGGCGGAGCCTCCGAGCGCAGCGTCCCGGCCACCAAGATTGAAATTACCGTGTCCTGCCGGAACCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTAGACCTTGATACCTTCTCCAAGTCCGACCCCATGGTGGTGCTTTACACGCAGAGCCGGGCCAGCCAGGAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGCGGGAGTTCGGACGGACCGAGGTGATTGATAACACGCTGAACCCAGACTTCGTGCGCAAATTCGTCCTCGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TATTTCTTTGAGGAAAAGCAAAATCTGCGCTTCGATGTGTACAACGTGGACTCCAAAACCAACATCTCCAAACC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGGATTTCCTGGGACAAGCGTTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGAGTAGAGCGAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCCTCACGGGTGTACCAGGCAAGAAGTGTGGGACCATATTGCTGACTGCAGAAGAGCTTAGCAATTGTCGGGAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATTGCCACCATGCAGCTGTGTGCAAACAAGCTGGACAAGAAGGACTTCTTTGGGAAATCAGACCCCTTCCTTGT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GTTCTACAGGAGCAATGAGGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACGCTGAATC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTGTGTGGCAGCCCTTCAGCATCCCTGTGCGGGCTCTGTGCAATGGAGACTATGACAGAACGGTGAAGATTGAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GTGTACGACTGGGACCGGGATGGAAGCCACGATTTCATTGGTGAGTTCACCACCAGCTACCGGGAGCTGAGCAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGCCCAGAACCAGTTCACAGTATATGAGGTTCTTAACCCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACT 814
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------ATGAGGTTCTTAACCCTCGGAAGAAATGTAAGAAGAAGAAATATGTCAACT 51
Query 815 CAGGAACTGTGACGCTGCTCTCCTTCTCTGTGGACTCTGAATTCACTTTTGTTGATTACATCAAGGGAGGGACA 888
|||||||| ||||
Sbjct 52 CAGGAACT--------------------------------------------------------------GACA 63
Query 889 CAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTTCCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 CAGCTGAACTTCACAGTAGCCATTGACTTCACGGCTTCCAATGGGAATCCTCTGCAGCCTACCTCCCTGCACTA 137
Query 963 CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 CATGAGTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATCCAGGACTATGACA 211
Query 1037 GTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAAGCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 GTGATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAAGCTGCCCCCAGAGGGACGGATCTCCCACCAGTTCCCC 285
Query 1111 CTGAACAACAATGATGAGGACCCCAACTGTGCGGGCATCGAGGGTGTGCTGGAGAGCTATTTCCAGAGCCTGCG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 CTGAACAACAATGATGAGGACCCCAACTGTGCGGGCATCGAGGGTGTGCTGGAGAGCTATTTCCAGAGCCTGCG 359
Query 1185 CACAGTGCAGCTCTATGGGCCCACCTACTTTGCTCCTGTCATCAACCAAGTGGCCAGGGCTGCAGCCAAGATCT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CACAGTGCAGCTCTATGGGCCCACCTACTTTGCTCCTGTCATCAACCAAGTGGCCAGGGCTGCAGCCAAGATCT 433
Query 1259 CTGATGGCTCCCAGTACTATGTTCTGCTCATCATCACTGATGGGGTCATCTCTGACATGACGCAGACCAAGGAG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 CTGATGGCTCCCAGTACTATGTTCTGCTCATCATCACTGATGGGGTCATCTCTGACATGACGCAGACCAAGGAG 507
Query 1333 GCCATCGTCAGCGCCTCCTCATTGCCCATGTCTATCATTATCGTCGGTGTAGGACCAGCCATGTTTGAGGCAAT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 GCCATCGTCAGCGCCTCCTCATTGCCCATGTCTATCATTATCGTCGGTGTAGGACCAGCCATGTTTGAGGCAAT 581
Query 1407 GGAAGAGTTGGACGGTGATGATGTGCGCGTGTCCTCTAGGGGACGCTACGCAGAGCGGGACATCGTTCAG---- 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 GGAAGAGTTGGACGGTGATGATGTGCGCGTGTCCTCTAGGGGACGCTACGCAGAGCGGGACATCGTTCAGTTCG 655
Query 1477 ---------GA----AGGTTG-CTG----------CAG-------CCTTGGCAC------------ATCCGTGG 1507
|| |.|||| |.| ||| .|.||||.| || |||.
Sbjct 656 TCCCATTCCGAGACTATGTTGACCGGTCGGGGAACCAGGTGTTGAGCATGGCCCGACTGGCCAAGGAT--GTGC 727
Query 1508 TG------------------------------------------------------------------------ 1509
||
Sbjct 728 TGGCCGAGATCCCGGAGCAGCTGCTGTCCTATATGCGCACCAGAGACATCCAGCCTCGGCCCCCACCCCCTGCC 801
Query 1510 --------------------------------- 1509
Sbjct 802 AACCCCAGCCCGATCCCAGCTCCAGAGCAGCCC 834
