Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13283
Subject:
XR_924105.3
Aligned Length:
1813
Identities:
1000
Gaps:
718

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGTGGCCGCCGGCGTCCGGGTACCCGAGGGCTCTCCCGCGTTGCTGGCACCGCTGGCGCCGCGGTCTCGTAGC  74

Query    1  -----------------------------------------ATGGCGCGCCTGGGCGCTGTGCGCTCCCACTAC  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct   75  GCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTAC  148

Query   34  TGCGCCCTGCTGCTGGCCGCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTC  107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCGCCCTGCTGCTGGCCGCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTC  222

Query  108  CAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAG  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAG  296

Query  182  CGCGGGGCTCCGTGGCGCCAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGGAC  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGCGGGGCTCCGTGGCGCCAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGGAC  370

Query  256  TACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCG  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTCGCGCTGCG  444

Query  330  CTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCC  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCC  518

Query  404  GCGAGGTGGCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCAC  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCGAGGTGGCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCAC  592

Query  478  GATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGG  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGG  666

Query  552  AACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGCATCAGATCATGCCCAAAG------AGATCC  619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||.||
Sbjct  667  AACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGGGCTACAGAGCC  740

Query  620  TGCA----GATCATTCAG-------------CTGGACCTAG---ACCTGAAGTT-------TAAGACCAACATC  666
            .|.|    ||.|||  ||             |.|||..|.|   |...||||||       |.|||..|.||.|
Sbjct  741  AGGAAGAGGAGCAT--AGAAAGAAAAAGGAACAGGAAATTGTTCAAAAGAAGTTCATGAAATGAGAAAAGCAGC  812

Query  667  -----------CGGGAGTTGTTTG---------------AGGAATTTGACAGTTTCCT----------------  698
                       |||||.|.|   |               |||||   ||||..|||||                
Sbjct  813  AGGAAACAGCTCGGGAATCG---GCGAGGCTGCAGCCGAAGGAA---GACATCTTCCTTTTAAGCAGTGACTCG  880

Query  699  ---------GCCA---------------GGCGCCATCATCG-GCA--TAGC--CCGGGAGATGCAG--------  735
                     ||||               |.||||||| |.| |||  |.||  ||.||.|| ||||        
Sbjct  881  GGAATCGAGGCCACTTCCATCCTGTAACGACGCCATC-TGGAGCATGTGGCTTCCAGGGGA-GCAGTGGCTGAG  952

Query  736  -----CCAGT------------TTACAG---------GCACACA----TTCTGGC----AGT---TCCGCCATG  772
                 .||||            .|||||         |||||||    |||| ||    |||   ||.||||.|
Sbjct  953  GCCCTGCAGTGGCTTCTCACTGCTACAGTCCAGAGTTGCACACAGCACTTCT-GCTCATAGTCCATCAGCCAGG  1025

Query  773  AGAACCCCCAGACCCGGGTTGGGGGC-CCGCCCCCCGAGG---------GGC----TGCCGGGCTTC-------  825
            ||     |.||.|     .||.||.| ||.|.|..|.|||         |||    || ||||..||       
Sbjct 1026  AG-----CTAGTC-----ATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTG-CGGGAATCTCCATCT  1088

Query  826  -AACAGC---GGGGTG-------------ATG----------------------------------------TT  842
             ||||||   .|||||             |||                                        ||
Sbjct 1089  GAACAGCCCATGGGTGCAGCAAAGTCAACATGCAACACAGAACTCATTGTCGTCCTCTCCCCAAATGTGCCCTT  1162

Query  843  GCTGAACCTGG---------AGG--CCATGCGCCAG-----------------------TCC-------CCGC-  874
            .|.|||.||.|         |||  .|.||.|||||                       |||       |||| 
Sbjct 1163  TCCGAAGCTTGGCTAATGACAGGTTGCTTGAGCCAGAAACAAAGGAATGGTCTTAGACTTCCCTTCTGTCCGCA  1236

Query  875  --------------TCT-ACA--------------------GCCGCCTGCT----------GGAGCCG--GCGC  901
                          ||| |||                    |||..|||||          || ||.|  ||.|
Sbjct 1237  TTCCCCCAGTTCCATCTCACACATGTCTCCTGAGAGCTTCTGCCCTCTGCTTCTGTCCGCCGG-GCTGGTGCTC  1309

Query  902  AG---GTGCA-GCAGC-TGGCC-----GAC-----AAGTACC-----------------------------ACT  931
            ||   ||||| ||.|| |||||     |||     |||..||                             .||
Sbjct 1310  AGCCAGTGCACGCTGCGTGGCCCTCCTGACTGTAGAAGAGCCTCTCTTGTTATGGGGAGAGGACTTCTCTGTCT  1383

Query  932  TCCGCGGCCACCTCGG-GGACCA-------------GGACTT-CTTCACC---------------------ATG  969
            ||||.||  ||.|.|| .||.||             |.|||| |.|.|||                     |||
Sbjct 1384  TCCGAGG--ACTTAGGCCGAGCATTACTGCCTGTGTGTACTTCCCTGACCGCTCTGCCCTGGCAGAATTTGATG  1455

Query  970  ATCGGCA----TGG------------AGCACCCCA--------------AGCTCTTCCAT--GTGCT-------  1004
            .||..||    |||            ||| |||.|              ||||.||.|||  .||||       
Sbjct 1456  CTCAACAACTGTGGCTCTGAGGGCACAGC-CCCGATTGCTCTGGGGTAGAGCTTTTTCATCGTTGCTCTAAGTT  1528

Query 1005  ----------GGA----CTGTACC---TGGAACCGGCAGCTGTG-------------CACCT------------  1036
                      |||    ||.||||   | |||||.|...|||||             |.|||            
Sbjct 1529  TCTTAAATGGGGAAGCTCTTTACCAAGT-GAACCTGGTTCTGTGAGTCTTGTATTTCCTCCTTTTAAAAAATAA  1601

Query 1037  --GGTG----------------GAGGGAC------------CATGG---CTACAGTGACGTCTTCGAGGCCTAT  1077
              |.||                .||||||            |||||   .||||     |||||          
Sbjct 1602  TAGTTGTTGTTGAATGTGTACTAAGGGACAATCCAAGCCCTCATGGAGCTTACA-----GTCTT----------  1660

Query 1078  TTCAGGTGTGAGGGCCAC---------GTCA------AGATCTACCAC-------GGGAAC--TGCAACACT--  1125
               |.|.|.||||.|.||         ||.|      ||||.|||.||       |||.||  ||..|||||  
Sbjct 1661  ---ATGAGAGAGGCCAACCATAGATAAGTAAACAAACAGATGTACAACTGTGGCTGGGCACGGTGGCACACTCA  1731

Query 1126  ------CCCATC----CCGGAGGAC------------  1140
                  ||||.|    |.|||||.|            
Sbjct 1732  TGTAGACCCAGCTTCTCAGGAGGCCAAGGAGGGAGGA  1768

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