Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13287
Subject:
XM_011533428.2
Aligned Length:
3078
Identities:
2087
Gaps:
987

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGATGATTCCACACTGCATGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGATTTTTATTCAAGAACCAAGTCCTGTAATGTTCCCTTTGGATTCTGAGGAGAAAAAAGTGAAGCTCAATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGAAGTTAAAGGAAATCCAAAACCTCATATCAGGTGGAAGTTAAATGGAACAGATGTTGACACTGGTATGGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGCTACAGTGTTGTTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGCACAGCGACAAACTCGTTTGGAACAATTGTTAGCAGAGAAGCAAAGCTTCAGTTTGCTTATCTTGACAACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAAAACAAGAACAAGAAGCACTGTGTCTGTCCGTCGAGGTCAAGGAATGGTGCTACTGTGTGGCCCGCCACCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATTCTGGAGAGCTGAGTTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAATCGCCGCTTTGTTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAAGAGACTGGGAATCTGTATATTGCCAAAGTAGAAAAATCAGATGTTGGGAATTATACCTGTGTGGTTACCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATACCGTGACAAACCACAAGGTCCTGGGGCCACCTACACCACTAATATTGAGAAATGATGGAGTGATGGGTGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TATGAGCCCAAAATAGAAGTGCAGTTCCCAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAATG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTGCTTTAGGAAATCCAGTACCAACTATTATCTGGCGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAAGACACAAGTCAAATGGAATTCTTGAGATCCCTAATTTTCAGCAGGAGGATGCTGGTTTATATGAATGTGTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTGAAAATTCCAGAGGGAAAAATGTAGCAAGGGGACAGCTAACTTTCTATGCTCAACCTAATTGGATTCAAAA  962

Query    1  ----------------------ATGGAAGAAAATGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTA  52
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATAAATGATATTCACGTGGCCATGGAAGAAAATGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTA  1036

Query   53  CATACAAGTGGCTAAAAAATGGCGAACCTCTGCTAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAAC  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATACAAGTGGCTAAAAAATGGCGAACCTCTGCTAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAAC  1110

Query  127  ATAACAATAGTGAACCTCTCAGATGCTGGCATGTATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTC  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATAACAATAGTGAACCTCTCAGATGCTGGCATGTATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTC  1184

Query  201  CAACGCAGAGCTTAGTGTTATAGCTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCA  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAACGCAGAGCTTAGTGTTATAGCTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCA  1258

Query  275  AAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAAGGA  348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAAGGA  1332

Query  349  AGGGATATATTAAAAGAAAATGAAAGAATTACCATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAA  422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGGGATATATTAAAAGAAAATGAAAGAATTACCATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAA  1406

Query  423  ATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTAG  496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTAG  1480

Query  497  TGAAAGATCCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACCG  570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGAAAGATCCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACCG  1554

Query  571  TGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGA  644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGA  1628

Query  645  CAGAGATGGGGACCACTTTGAAAGAGTTGGAGG---GGATTCAGCTGGTGATTTGATGATCCGAAACATCCAAC  715
            |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAGAGATGGGGACCACTTTGAAAGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAAC  1702

Query  716  TGAAGCATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGATT  789
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGAAGCATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGATT  1776

Query  790  GTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTG  863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTG  1850

Query  864  GAGACCCGGGCCTGACAATCACAGCCCCATCACCATGTATGTCATTCAAGCCAGGACTCCGTTCTCCGTGGGCT  937
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1851  GAGACCCGGGCCTGACAACCACAGCCCCATCACCATGTATGTCATTCAAGCCAGGACTCCATTCTCCGTGGGCT  1924

Query  938  GGCAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCT  1011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GGCAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCT  1998

Query 1012  TGGGTTGAATATGAATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAA  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TGGGTTGAATATGAATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAA  2072

Query 1086  ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAAC  1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAAC  2146

Query 1160  TGGTTATAACCTGGGAGACGGTCCCTGAGGAATTACAGAATGGTCGTGGCTTTGGTTATGTGGTGGCCTTCCGG  1233
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 2147  TGGTTATAACCTGGGAGACGGTCCCTGAGGAATTACAGAATGGTCGAGGCTTTGGTTATGTGGTGGCCTTCCGG  2220

Query 1234  CCCTACGGTAAAATGATCTGGATGCTGACAGTGCTGGCCTCAGCTGACGCCTCTAGATACGTGTTCAGGAATGA  1307
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 2221  CCCTACGGTAAAATGATCTGGATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGATACGTGTTCAGGAATGA  2294

Query 1308  GAGCGTGCACCCCTTCTCTCCCTTTGAGGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGTC  1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GAGCGTGCACCCCTTCTCTCCCTTTGAGGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGTC  2368

Query 1382  CCACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCT  1455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  CCACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCT  2442

Query 1456  GCCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAA  1529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GCCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAA  2516

Query 1530  ATATTGGAGACATGAAGACAAAGAAGAAAATGCTAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAAAA  1603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  ATATTGGAGACATGAAGACAAAGAAGAAAATGCTAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAAAA  2590

Query 1604  TCACGAACTTAAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCTCT  1677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  TCACGAACTTAAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCTCT  2664

Query 1678  AGTGCAACAGTCAATGTGACAACCCGAAAGCCACCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCATC  1751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  AGTGCAACAGTCAATGTGACAACCCGAAAGCCACCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCATC  2738

Query 1752  AGACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAG  1825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  AGACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAG  2812

Query 1826  TCTTGTACAGATGGAACAGACAAAGCAGCACATCTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTG  1899
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  TCTTGTACAGATGGAACAGACAAAGCAGCACATCTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTG  2886

Query 1900  CCTTTCGATGAAGATTATATAATAGAAATTAAGCCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAAAT  1973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CCTTTCGATGAAGATTATATAATAGAAATTAAGCCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAAAT  2960

Query 1974  TCGAATTCCAAAGATATCAAATGCCTACGCGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTCAG  2047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  TCGAATTCCAAAGATATCAAATGCCTACGCGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTCAG  3034

Query 2048  CCATCAGTACAATAATGATTTCCCTCACAGCTAGGTCCAGTTTA  2091
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  CCATCAGTACAATAATGATTTCCCTCACAGCTAGGTCCAGTTTA  3078

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