Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13382
- Subject:
- XM_017003561.1
- Aligned Length:
- 2955
- Identities:
- 1171
- Gaps:
- 1755
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGAAGCCTGCAGCACGCTGGCCCAGATCCAGAGGCTGGTGGCCGAGCCTCCCAAGCCCGACGTGGCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTGGACTGCGAGTCAGAAACAACCTCTGTTGAGATTGCATCGAATCCAGAAGACACCTGGGACTCTAAGACAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGCAGAAATATGGCTTGAAGGCCCAGAAGCTATCCTTGTATGATGTGCTTGCCGACTGCTCTTTCCGCCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGATGGGGTTGTGGATATAAAAGCCAAACCGGAGAATGAGTCCGTGCAGACCAGTGCGGAGACGAACAAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACAGTCCATGCAAAATATTGCAGCAGGTTTGTCCATGCTCCCTGGAAGGATGGGAGCTTGGTCCACGTCAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTACCAAAGAGAAGTGCAAGTGGTACAGTGAGAGAATCCACACAGCCCTGGCCCGGATCCGAAGGAGGATTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGCTACAGGATGGGAGTCAAAGCCTCTTTGGAAGATTGCATAATGATTGCATCTACATTCTCATTGACACGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCACTCAATGAAGAGCAAACTGGACTTGGTGAAGGACAAGATCATTCAGTTCATACAGGAACAGCTGAAATATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGTAAGTTTAACTTTGTGAAGTTTGATGGTCAAGCAGTTGCTTGGCGGGAACAACTTGCTGAAGTCAATGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATAATTTGGAACAGGCTCAGTCCTGGATTAGAGACATAAAGATTGGAAGCTCCACAAACACCCTGAGTGCCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAAAACTGCTTTTGCTGATAAAGAAACACAGGCAATCTACCTTCTGACCGATGGGAGACCTGATCAGCCACCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAACAGTTATAGACCAGGTCAAACGTTTTCAGGAAATTCCTATTTATACCATCTCCTTCAATTACAATGATGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGCAAACAGGTTTTTGAAAGAGGTTGCTGCTTTGACTGGAGGAGAGTTCCATTTTTATAATTTTGGTTGCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATCCCACTCCCCCAGAGGCTGTTCAGAATGAAGATCTGACTCTTTTAGTTAAGGAAATGGAACAGGGTCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGATCTGGAGAAGATGCAAGACCTTTATTCTGAGTCCTTGATCATGGACTGGTGGTACAATGCAGAAAAGGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGACAGCAAGCATCAAAAGGAAATCTGTTCTATGATTTCAACCCCAGAAAAGTGTGCAAAGCCTCAATCTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTCGATTCAACACAAACTTCATCTCTGAATATGTTGAAGGGACCATGGGGCCTTTCAGATCAAAAGGTTCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAAGAAAGTCCTTCACGCAGAATCAACCAAAACCAGCCTGCTCAGAAGCCAGATGTCCTCCCTCAGGAGCTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTTGCAGTGAAAGGAAGGATGGCCTCTCCAATGCCAGCAGCCGGAGGACTGCTCTAAGTGACAAAGAAATGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCTTGCTGGCTGAGGAGTGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGAGAAGGAAGCCAGGTTTATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCACGATTCTTCAGATGTGTCTTCAGAAAACTGGCTGAAGACCTATGGCTTGGTCGCCAAGAAACTCACCCTC 1554
Query 1 -------------------------------------------AT------GGCCACGAAAGGCATG------- 18
|| |.||..||.|.|||||
Sbjct 1555 ATGGATGCCTTGTCAGTGGCAGCAGTCCCGCACAGCTCCACCTATGTTCCCGTCCTGGACAAGCATGTCGTGTC 1628
Query 19 --AGG---TTGAAATCCACAAAAGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTA 87
||| ||| |.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TAAGGTCTTTG----------ATGAGGTGTTCCCTCTGGCACATGTGTGCAACGACACAAATAAGATGACATTA 1692
Query 88 ATTAACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCG 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 ATTAACCCCCAAGGAGCCAAACTCAATATCTACAAGCGAAAAGTGGAACAGGCAATTCAATCCTATGAAAAGCG 1766
Query 162 CTTGAATAAAATTGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAAGTTAGATGCAAACAAACCAATACAGT 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767 CTTGAATAAAATTGTTTGGCGAGCATTATCTCAAGAGGAAAAAGAAAAGTTAGATGCAAACAAACCAATACAGT 1840
Query 236 ACTTGGAAAACAAAACAGTTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCG 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1841 ACTTGGAAAACAAAACAGTTTTAAACCAGGCTTTAGAACGGTTGAATTGGCCCATTTCACTGAAAGAGCTGTCG 1914
Query 310 ATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAA 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 ATGCTGGAAAGTGAAATCCTAGCTGGGAAAATGTACATCCAGCAGGCCATGGAACTCCAGGAGGCTGCCAAGAA 1988
Query 384 GAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAGAAAACCAAATCAAAAA 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1989 GAATTATGCAAACAAGGCCCCGGGAGAGCAACAGAAATTGCAAGGAAATCCAACAAAGAAAACCAAATCAAAAA 2062
Query 458 GACCAGATCCCCTCAAAGGACAGAAGGTTATTGCAAGATGCGATGAAAATGGCTTTTATTTTCCAGGGGTTGTG 531
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 2063 GACCAGATCCCCTCAAAGGACAGAAGGTTATTGCAAGATGTGATGAAAATGGCTTTTATTTTCCAGGGGTTGTG 2136
Query 532 AAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTT 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137 AAGAAGTGTGTGAGCCGCACCCAAGCACTGGTGGGCTTCAGTTACGGAGACACCAAGGTCGTGTCCACCTCCTT 2210
Query 606 CATCACGCCTGTGGGGGGCGCCATGCCCTGCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGA 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2211 CATCACGCCTGTGGGGGGCGCCATGCCCTGCCCGCTGCTCCAGGTTGGAGATTATGTGTTTGCCAAAATTGTGA 2284
Query 680 TACCCAAAGGATTTGACTTCTATGTCCCTGCCATTGTCATAGCACTTCCCAATAAGCATGTGGCCACAGAAAAA 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2285 TACCCAAAGGATTTGACTTCTATGTCCCTGCCATTGTCATAGCACTTCCCAATAAGCATGTGGCCACAGAAAAA 2358
Query 754 TTCTACACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAAAA 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2359 TTCTACACAGTTTTGAAGTGTAACAACCGGAGAGAATTTTGCCCTCGGAGTGCACTTATTAAGATCAGCCAAAA 2432
Query 828 CAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGGTCCAGAAGTAGAGGATGTGGAGG 901
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 2433 CAAGTATGCGCTCTCTTGCTCTCATATAAAGTCACCCCCAATTCCTGAGGATCCAGAAGTAGAGGATGTGGAGG 2506
Query 902 CGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAG 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2507 CGAGGAACTCTGCTTTCCTCTTCTGGCCACTGAAAGAAGCGGACACGCAGGATTCCAGAGAGCCAAGACGAGAG 2580
Query 976 AAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTC 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2581 AAGCCCAGGAGGAAAAAGAGGCCCGCCAAGCAGCCACTCCAGCAGGCGGCGCCCTCGGACTCGGACGGCTCCTC 2654
Query 1050 CCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAAG--------------------AC 1103
||||||||||||||||||||||||||||||||||||||||||||||||||.| ||
Sbjct 2655 CCACGGCATCAGCTCCCATGGGTCCTGCCAGGGGACACACCCCGAGCCCAGGGTTTGGGTGATGGGGGGGGAAC 2728
Query 1104 AGCCCACCTCCACTTCCCCGCGGCCGGGCGTCTAGGACTCAGCAGCCACGCC-----ATC----------ATTG 1162
| |.||.|| ||.|.| |||||.| ||.|| ||| ||.|
Sbjct 2729 A--CAACATC-----------------GCTTAT----CTCAGGA---ACACCCTGAAATCCCTTTCAAGAATAG 2776
Query 1163 CCACACCTCCACCTCGAGCAGCCCT----------GCCCTG--TACTCTCCA----AGC---CACCC--ACAGC 1215
.|||||| .||.|| |.||| |.|||| ||..||||| ||| .|||| |||.|
Sbjct 2777 -TACACCT-AACATC-----GTCCTTCAGATTCTGGGCCTGTTTAGGCTCCAGTGCAGCAAAGACCCTAACATC 2843
Query 1216 ----AGCAAAGGGCTGAGGA----GCGTCCCTGAGA-----------CACTT----------------- 1248
||.|| .||||| | ||.|||| .||| |||||
Sbjct 2844 CTTAAGTAA--TGCTGA--ACTCTGCTTCCC-CAGACAGCCCACCTCCACTTCCCCGCGGCCGGGCGTC 2907
