Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13390
- Subject:
- XM_011523725.1
- Aligned Length:
- 1536
- Identities:
- 1000
- Gaps:
- 534
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTGGGGGGATGTCAGCGGAGTGCCCTGAGCCTGGGCCAGGAGGTCTGCAGGGCCAGTCCCCAGGGCCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCAGTGTCCCCCTCCCATCACGCCCACCTCCTGGAGCCTGCCCCCGTGGAGGGCCTACGTGGCTGCCGCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTCTGCTACATCAACCTCCTGAATTACATGAACTGGTTCATCATTGCAGGAGTGCTGCTGGATATACAGGAG 222
Query 1 ----------------------ATGCTGGTTTGCTTCAGACT-------------------------------- 20
||||||||||||||||||||
Sbjct 223 GTTTTCCAGATCAGTGACAACCATGCTGGTTTGCTTCAGACTGTCTTCGTTAGCTGCCTGCTGCTGTCTGCACC 296
Query 21 -------------------------------------------------------------------------- 20
Sbjct 297 TGTGTTTGGCTACCTGGGCGACCGACATAGCCGCAAGGCTACCATGAGCTTCGGTATCTTGCTGTGGTCAGGAG 370
Query 21 -------------------------------GTATTCTTGGCTCTTCTTCCTGTCCCGGGGCATCGTGGGCACT 63
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGCCTCTCTAGCTCCTTCATCTCCCCCCGGTATTCTTGGCTCTTCTTCCTGTCCCGGGGCATCGTGGGCACT 444
Query 64 GGCTCGGCCAGCTACTCCACCATCGCGCCCACCGTCCTGGGCGACCTCTTCGTGAGGGACCAGCGCACCCGCGT 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCTCGGCCAGCTACTCCACCATCGCGCCCACCGTCCTGGGCGACCTCTTCGTGAGGGACCAGCGCACCCGCGT 518
Query 138 GCTGGCTGTCTTCTACATCTTTATCCCCGTTGGAAGTGGTCTGGGCTACGTGCTGGGGTCGGCTGTGACGATGC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGGCTGTCTTCTACATCTTTATCCCCGTTGGAAGTGGTCTGGGCTACGTGCTGGGGTCGGCTGTGACGATGC 592
Query 212 TGACTGGGAACTGGCGCTGGGCCCTCCGAGTCATGCCCTGCCTGGAGGCCGTGGCCTTGATCCTGCTTATCCTG 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGACTGGGAACTGGCGCTGGGCCCTCCGAGTCATGCCCTGCCTGGAGGCCGTGGCCTTGATCCTGCTTATCCTG 666
Query 286 CTGGTTCCAGACCCACCCCGGGGAGCTGCCGAGACACAGGGGGAGGGGGCCGTGGGAGGCTTCAGAAGCAGCTG 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 667 CTGGTTCCAGACCCACCCCGGGGAGCTGCCGAGACACAGGGGGAGGGGGCCGTGGGAGGCTTCAGGAGCAGCTG 740
Query 360 GTGTGAGGACGTCAGATACCTGGGGAAAAACTGGAGTTTTGTGTGGTCGACCCTCGGAGTGACCGCCATGGCCT 433
||||||||||||||||||||||||||||||
Sbjct 741 GTGTGAGGACGTCAGATACCTGGGGAAAAA-------------------------------------------- 770
Query 434 TTGTGACTGGAGCCCTGGGGTTCTGGGCCCCCAAGTTTCTGCTCGAGGCACGCGTGGTTCACGGGCTGCAGCCT 507
Sbjct 771 -------------------------------------------------------------------------- 770
Query 508 CCCTGCTTCCAGGAGCCGTGCAGCAACCCCGACAGCCTGATTTTTGGGGCACTGACCATCATGACCGGCGTCAT 581
|||||||||||||||||||||||||||||||||||||||
Sbjct 771 -----------------------------------CCTGATTTTTGGGGCACTGACCATCATGACCGGCGTCAT 809
Query 582 TGGGGTCATCTTGGGGGCAGAAGCTTCGAGGAGGTACAAGAAAGTCATTCCAGGAGCTGAGCCCCTCATCTGCG 655
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 TGGGGTCATCTTGGGGGCAGAAGCTGCGAGGAGGTACAAGAAAGTCATTCCAGGAGCTGAGCCCCTCATCTGCG 883
Query 656 CCTCCAGCCTGCTTGCCACAGCCCCCTGCCTCTACCTGGCTCTCGTCCTGGCCCCGACCACCCTGCTGGCCTCC 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 CCTCCAGCCTGCTTGCCACAGCCCCCTGCCTCTACCTGGCTCTCGTCCTGGCCCCGACCACCCTGCTGGCCTCC 957
Query 730 TATGTGTTCCTGGGCCTTGGGGAGCTGCTTCTGTCCTGCAACTGGGCAGTGGTTGCCGACATCCTGCTGTCTGT 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TATGTGTTCCTGGGCCTTGGGGAGCTGCTTCTGTCCTGCAACTGGGCAGTGGTTGCCGACATCCTGCTGTCTGT 1031
Query 804 GGTGGTGCCCAGATGCCGGGGGACGGCAGAGGCACTTCAGATCACGGTGGGCCACATCCTGGGAGACGCTGGCA 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 GGTGGTGCCCAGATGCCGGGGGACGGCAGAGGCACTTCAGATCACGGTGGGCCACATCCTGGGAGACGCTGGCA 1105
Query 878 GCCCCTATCTCACAGGACTTATCTCTAGTGTCCTGCGGGCCAGGCGCCCTGACTCCTATCTGCAGCGCTTCCGC 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 GCCCCTATCTCACAGGACTTATCTCTAGTGTCCTGCGGGCCAGGCGCCCTGACTCCTATCTGCAGCGCTTCCGC 1179
Query 952 AGCCTGCAGCAGAGCTTCCTGTGCTGCGCCTTTGTCATCGCCCTGGGGGGCGGCTGCTTCCTGCTGACTGCGCT 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 AGCCTGCAGCAGAGCTTCCTGTGCTGCGCCTTTGTCATCGCCCTGGGGGGCGGCTGCTTCCTGCTGACTGCGCT 1253
Query 1026 GTACCTGGAGAGAGACGAGACCCGGGCCTGGCAGCCTGTCACAGGGACCCCAGACAGCAATGATGTGGACAGCA 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 GTACCTGGAGAGAGACGAGACCCGGGCCTGGCAGCCTGTCACAGGGACCCCAGACAGCAATGATGTGGACAGCA 1327
Query 1100 ACGACCTGGAGAGACAAGGCCTACTTTCGGGCGCTGGCGCCTCTACAGAGGAGCCC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 ACGACCTGGAGAGACAAGGCCTACTTTCGGGCGCTGGCGCCTCTACAGAGGAGCCC 1383