Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13390
- Subject:
- XR_934008.1
- Aligned Length:
- 1685
- Identities:
- 882
- Gaps:
- 800
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTCAGGCCAAGAGCTGCAGGCTGGCATGGCTGGGGGGATGTCAGCGGAGTGCCCTGAGCCTGGGCCAGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCTGCAGGGCCAGTCCCCAGGGCCAGGCAGGCAGTGTCCCCCTCCCATCACGCCCACCTCCTGGAGCCTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTGGAGGGCCTACGTGGCTGCCGCCGTCCTCTGCTACATCAACCTCCTGAATTACATGAACTGGTTCATCAT 222
Query 1 --------------------------------------------------ATGCTGGTTTGCTTCAGACT---- 20
||||||||||||||||||||
Sbjct 223 TGCAGGAGTGCTGCTGGATATACAGGAGGTTTTCCAGATCAGTGACAACCATGCTGGTTTGCTTCAGACTGTCT 296
Query 21 -------------------------------------------------------------------------- 20
Sbjct 297 TCGTTAGCTGCCTGCTGCTGTCTGCACCTGTGTTTGGCTACCTGGGCGACCGACATAGCCGCAAGGCTACCATG 370
Query 21 -----------------------------------------------------------GTATTCTTGGCTCTT 35
|||||||||||||||
Sbjct 371 AGCTTCGGTATCTTGCTGTGGTCAGGAGCTGGCCTCTCTAGCTCCTTCATCTCCCCCCGGTATTCTTGGCTCTT 444
Query 36 CTTCCTGTCCCGGGGCATCGTGGGCACTGGCTCGGCCAGCTACTCCACCATCGCGCCCACCGTCCTGGGCGACC 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCCTGTCCCGGGGCATCGTGGGCACTGGCTCGGCCAGCTACTCCACCATCGCGCCCACCGTCCTGGGCGACC 518
Query 110 TCTTCGTGAGGGACCAGCGCACCCGCGTGCTGGCTGTCTTCTACATCTTTATCCCCGTTGGAAGTGGTCTGGGC 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCTTCGTGAGGGACCAGCGCACCCGCGTGCTGGCTGTCTTCTACATCTTTATCCCCGTTGGAAGTGGTCTGGGC 592
Query 184 TACGTGCTGGGGTCGGCTGTGACGATGCTGACTGGGAACTGGCGCTGGGCCCTCCGAGTCATGCCCTGCCTGGA 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TACGTGCTGGGGTCGGCTGTGACGATGCTGACTGGGAACTGGCGCTGGGCCCTCCGAGTCATGCCCTGCCTGGA 666
Query 258 GGCCGTGGCCTTGATCCTGCTTATCCTGCTGGTTCCAGACCCACCCCGGGGAGCTGCCGAGACACAGGGGGAGG 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCCGTGGCCTTGATCCTGCTTATCCTGCTGGTTCCAGACCCACCCCGGGGAGCTGCCGAGACACAGGGGGAGG 740
Query 332 GGGCCGTGGGAGGCTTCAGAAGCAGCTGGTGTGAGGACGTCAGATACCTGGGGAAAAACTGGAGTTTTGTGTGG 405
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 741 GGGCCGTGGGAGGCTTCAGGAGCAGCTGGTGTGAGGACGTCAGATACCTGGGGAAAAACTGGAGTTTCGTGTGG 814
Query 406 TCGACCCTCGGAGTGACCGCCATGGCCTTTGTGACTGGAGCCCTGGGGTTCTGGGCCCCCAAGTTTCTGCTCGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCGACCCTCGGAGTGACCGCCATGGCCTTTGTGACTGGAGCCCTGGGGTTCTGGGCCCCCAAGTTTCTGCTCGA 888
Query 480 GGCACGCGTGGTTCACGGGCTGCAGCCTCCCTGCTTCCAGGAGCCGTGCAGCAACCCCGACAGCCTGATTTTTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCACGCGTGGTTCACGGGCTGCAGCCTCCCTGCTTCCAGGAGCCGTGCAGCAACCCCGACAGCCTGATTTTTG 962
Query 554 GGGCACTGACCATCATGACCGGCGTCATTGGGGTCATCTTGGGGGCAGAAGCTTCGAGGAGGTACAAGAAAGTC 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 963 GGGCACTGACCATCATGACCGGCGTCATTGGGGTCATCTTGGGGGCAGAAGCTGCGAGGAGGTACAAGAAAGTC 1036
Query 628 ATTCCAGGAGCTGAGCCCCTCATCTGCGCCTCCAGCCTGCTTGCCACAGCCCCCTGCCTCTACCTGGCTCTCGT 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATTCCAGGAGCTGAGCCCCTCATCTGCGCCTCCAGCCTGCTTGCCACAGCCCCCTGCCTCTACCTGGCTCTCGT 1110
Query 702 CCTGGCCCCGACCACCCTGCTGGCCTCCTATGTGTTCCTGGGCCTTGGGGAGCTGCTTCTGTCCTGCAACTGGG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCTGGCCCCGACCACCCTGCTGGCCTCCTATGTGTTCCTGGGCCTTGGGGAGCTGCTTCTGTCCTGCAACTGGG 1184
Query 776 CAGTGGTTGCCGACATCCTGCT---------------------------------------------------- 797
||||||||||||||||||||||
Sbjct 1185 CAGTGGTTGCCGACATCCTGCTGATGCTCCAGCTGGACCAGAGAGTGGAAGGCACGCCAGGCAGAAGGCGCAGC 1258
Query 798 ---------------------------------------------------------------------GTCTG 802
|||||
Sbjct 1259 TGAGTTCAAGGGCCTGGAGCATCCTGTCTCAGAGCGTTATTTTGGTCTGATGTCCACACGAAGCCTCCAGTCTG 1332
Query 803 TGGTGGTGCCCAGATGCCGGGGGACGGCAGAGGCACTTCAGATCACGGTGGGCCACATCCTGGGAGACGCTGGC 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGGTGGTGCCCAGATGCCGGGGGACGGCAGAGGCACTTCAGATCACGGTGGGCCACATCCTGGGAGACGCTGGC 1406
Query 877 AGCCCCTATCTCACAGGACTTATCTCTAGTGTCCTGCGGGCCAGGCGCCCTGACTCCTATCTGCAGCGCTTCCG 950
|||||||||
Sbjct 1407 AGCCCCTAT----------------------------------------------------------------- 1415
Query 951 CAGCCTGCAGCAGAGCTTCCTGTGCTGCGCCTTTGTCATCGCCCTGGGGGGCGGCTGCTTCCTGCTGACTGCGC 1024
Sbjct 1416 -------------------------------------------------------------------------- 1415
Query 1025 TGTACCTGGAGAGAGACGAGACCCGGGCCTGGCAGCCTGTCACAGGGACCCCAGACAGCAATGATGTGGACAGC 1098
Sbjct 1416 -------------------------------------------------------------------------- 1415
Query 1099 AACGACCTGGAGAGACAAGGCCTACTTTCGGGCGCTGGCGCCTCTACAGAGGAGCCC 1155
Sbjct 1416 --------------------------------------------------------- 1415