Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13397
- Subject:
- XR_928307.2
- Aligned Length:
- 5242
- Identities:
- 1481
- Gaps:
- 3719
Alignment
Query 1 ---------------------------------------ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 CTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT 74
Query 36 GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG 148
Query 110 AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG 222
Query 184 GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA 296
Query 258 AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG 370
Query 332 GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG 444
Query 406 CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG 518
Query 480 GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA 592
Query 554 AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC 666
Query 628 AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG 740
Query 702 CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG 814
Query 776 AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG 888
Query 850 TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC 962
Query 924 CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC 1036
Query 998 AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG 1110
Query 1072 AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC 1184
Query 1146 CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG 1258
Query 1220 CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG 1332
Query 1294 AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG- 1366
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGG 1406
Query 1367 -----ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCCAGCT----- 1424
..||.|...|||||| |||...|| |||||..||.| ||..||.|.||||||||..|.|||
Sbjct 1407 GTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTG 1480
Query 1425 CCTGGCTGGAGC----CAGCC---------GGCACCAACTCC-------AGAGACACAAGATCAA--------- 1469
||.|||.|| || ||.|| |||.||.||||| |||.||.||||..|||
Sbjct 1481 CCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCC 1553
Query 1470 -------------GTGCTGCTTC----------------CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCA 1513
||||||.|.| |||.|.||||..| ||...||.||||..|.||
Sbjct 1554 CCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA--- 1624
Query 1514 TCATCATCATCGCCACCTCTGTCCGAAAG--------------------------------------------- 1542
||| |||.|||||||
Sbjct 1625 -------------CAC--CTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGC 1683
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1684 TACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGC 1757
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1758 GGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACG 1831
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1832 GTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAAGCCTCGTCTGCAGCCCGCAGCTGCCACTGGCTCCA 1905
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1906 AGGGTGACGCTGGCTCTGAGGGTGATGCTGGCTCCGTGCTTCCTCCTGCCGCCTCCGTGCCTCCTCCCACCGCA 1979
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1980 CCTCCTCTCCTCCTCAAGACACCGTGCCAGGAGCTCCTTCGCCGTCCTCCGCATATGGTGGCACACCCTTCGAA 2053
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2054 GCAGAGCCCCGCTGGACCCTCCCCTTCCTGGGAGCTGCTGGAAGGACTTTGGGAACGAAGCCCCGGAAGCAGGA 2127
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2128 CCAGCTCCTTGAGGGCCACAGAGTGGACAGAAGGACCCAGCCTCACAGGACAGGCAGGGGCTGGCCTCAAACGC 2201
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2202 CCCCAGTGGCAGCCATGGCAGAACTTGGAGCGCTGGGGCATCCTCAGCTGCTCCTGCTCACAGCGGTGCATGAG 2275
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2276 GCTGGGACCCATGGGCAGAGTGGGCCGGACTGGTTGGGAGACGCATGTAGACCCAGCCAACCCTGTGGCTGGGC 2349
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2350 TTGGACAAGGGGCCTGGGCTGTGGGCCTTGGGCGATGGGCCTGGGCACTAGGCCTTGTGGTGGGGCTTGGGGGA 2423
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2424 TGGGCCTGGTCAGTGGGCCTCCTGATGGGGTGGGGCTGGAGGAGGATCTGGGTCCTCTCAGGCCTGTGCAGGCC 2497
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2498 AGGGATGGCTGGATCCACCCCCATTGAGGCCACATTGTCTCCTGAAGGGCAGATTCTTGCAGCCAAGGGTCCTA 2571
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2572 TGGGCAGAGGCAGACCTGGTTTGGGGGTGCTTCATGGCAAGGATAGACATGTGGTGTGGGGCTGAGAAGGAGGG 2645
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2646 GCCTGGCAGGGGTGGCACTGGTGTGGCCCAGGTGCTTAGTCCTTTTCTGCAAGTCCTCAGCCCTGGAGGCTGCA 2719
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2720 GGAACTCAGGTTTGCTCACCCTGTGGTTCCCTGCCCTAGACTGAGACCCAGCCTCGACTTCTGTGACCCCTGGT 2793
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2794 GGATCAGCCACTCCAGGTCCCCAGGCCGCTGGGCTCCCCTGCAGCACGGGAGTCTTTGGTGCCTGTGAGCTGCT 2867
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2868 TTGAGTGGCCTGCCCTGCTGCTGACAGCAACTGACGTGTTGAATTCCCAAGCGAGAGTGCTTAGGACAGGGCCA 2941
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2942 GACTTCCTCTTGTGGGCGCAGAGGCAGGAAGTAGGAAAGTGGCTGCCAAGCCTGAGGACAGGGTGGGGGCATCC 3015
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3016 CAGCTGCAGGCCCAGTTGCCCCGAGCCGGCCATGCTTTCCGCTCTGCAGCGGCACTGCCTGGGGTTTGGGCAGG 3089
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3090 GCCAGGCCTGCAGGGCTGGTCACGGCTGTGGGGCTGGGGGCAGCGAGTTGACCCAGTGCAGGGGGGTCTCCCAC 3163
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3164 AGGGGTCCCTGTGCCCTGAGGGCACTGGGCAGGCAGTTTCCTTTGAGGTGTGTGTGCTGCTCTGCGAGTGTCTG 3237
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3238 GGGAGGGCGGTCCCAAAGGCTGCTCTCTCTGGCCCCTGGAGGCCTCTGGCCTAGTGCTTGGGTATCCCTTGGAC 3311
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3312 TCCTGGAGTCAGGGGATGTGCAAGGGGCCCCCGTGGAGCACCCCCTGTGTTGGGAGGAGCAGGTGCCCAGGGCC 3385
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3386 TGTGGCTCTGCAGGGCTCACCTCACAGACTGGGGGCCTCCAAGACCTGACAAAGCCACTGGGCCCAGGGCTGAT 3459
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3460 GGCTGATGAGGTATTGGAGTGTCGCTCAGTACCACAGGTCCCACGCACCAAACCTGTCCTCACCCCACGAGCAA 3533
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3534 CACGCGGCCGCACAGCACCGGGAGCAGCCCCCCTCCCCTTGTGCATCTCTGTGCACTGCGCCGGGGCAGGACAT 3607
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3608 GGCGTGCCCACCTGGCAGCCTGGGCGCTGAGGGAGATGTTGCTGGCTGCGGAGCTGGGCAGTGGTTGTGTGAGG 3681
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3682 TGTCTTGAATGTGGGCAGTGCCATGCTGGCTAAGAATGCCCCTGGGACCGCCCTGGGTCTGTGGCCGGTGCATG 3755
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3756 CAGCCCTGGAGCAGCAGGACATCAGTCCCCATTCTGAGGGTGGGCCTCCAGGTCACACACTACGATCAGAGTCC 3829
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3830 CCAGGGCCAGGGCTAGGTGTAGAGCAGGATTGGGCACAGGCTGAGTCCAAGGGTGGGGTCCAGGGCTTGGCTGA 3903
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3904 GGCTGCGTGTGGTCACGGGGCAGAGAAAGTGTCCAGCCAGGGCACATGGCCTGTCCAGCACCACCTGTGTTAGC 3977
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 3978 CCAGACCACCATGGCCTTCCTGTCTCTGCTGGCAAATGCTCTCCACTGTCCACATTCACCTCTCAGCAACAGAA 4051
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4052 GCGAGGCCAGGCTGTTACCACTGCAGGTGTAAGGTGGCTCCTTTGCACGTGAGCGGGGCATTGCCCGGGCCCAG 4125
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4126 GCTAGCGCCTCCTCCCTGGCAGGCTGGTCCCTCCTGAGTGGCAATTGTGGGGGGATCCGTCACACCTCTGGCCC 4199
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4200 CATCTTCCTTCCCTCTCCTCCTCCATTGGCTCAGAGGGTCGTGACCCTAATGTGGCAGGACATAGAGAGCAGAG 4273
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4274 TTCAGTTGGGGGCTGTCTGCAAGTGAGCAAAGGGGTGCTTTGCTCCAGGAGCGGCCGAGGCCGTCACCCATACC 4347
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4348 CGCTCTCTGGGCTTTGGCTCCTTGTGCAGGAGCCTGGCTCTCCCCTCCCTGGCTAGGGCAGGAGCCCCCAGATG 4421
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4422 CGGCGATCAGGGTGTGTCTGCGAGTGCCTGCGGCTCCACTAGGGCCCTGCGCTGGGGGCAAGGGTGGGGTGGAG 4495
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4496 CTGGTGACCAAGGGTTCAAGGATCCCTGTGAGGCCTGGGTGGGGGCTTCTGAAGGCAGGGCTCATGGGTTCCAC 4569
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4570 CTCCTGCCCAGGGGGCTTGCAGAGATGGGGCCACAGTTCCCTGATGAGAGTAGGGAGTCCTTGCTGGGACGGTG 4643
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4644 GGGAGTGGCCTTGTCTTTCTGAGGACCCTCCTCCCTCAGAGCCAGTCGTGCCAGGCTGTGCCTGGCAGCAGTCC 4717
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4718 CTGTGGTTGTAATGGCCTCTCTATCCCAGGCCTTAAGACCCCTGAGGCTCAAGTCAGCTCAGGTCTGTGCCCTG 4791
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4792 GTAGGCACTGCAGGTGCACAGTTTGTTTAGATACTCCTGCCTCCCAAGCTCTTCTCCAGTTGCCTGATTGGAGG 4865
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4866 CAGGCCTTGCAAGGAACCTCCCTCCGGGAAGAAGGCTTGCCCGTGCTCGTGTTTGCTCGTGTTTGCATGTGGCT 4939
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 4940 CTGTTGAGGACCCCGGCTGTGCCTGCGCTCCTGGTGCCCAGGTGGCATGTGTCCTTCCTTTGGGTGGAAGACAA 5013
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 5014 TGCTGAGCATGGAATCTTCCGGATCCCTGGGGCTGCCCCGGCCCTGGTCTGGTGTCTCCCGTGGGCCCTGCTGA 5087
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 5088 TGTGGCTTCCCTGGGTGGCACTGCTGCAGCCACCGAGCCCGGCTTTTCCCAGATAGTATTGAAGCCAGCCTTGA 5161
Query 1543 -------------------------------------------------------------- 1542
Sbjct 5162 GGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCCGGCACCAAG 5223
