Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_13397
• Subject: XR_928308.1
• Aligned Length: 2575
• Identities: 1513
• Gaps: 1037

Alignment

Query    1  ---------------------------------------ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct    1  CTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT  74

Query   36  GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG  148

Query  110  AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG  222

Query  184  GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA  257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA  296

Query  258  AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG  370

Query  332  GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG  444

Query  406  CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG  518

Query  480  GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA  592

Query  554  AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC  666

Query  628  AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG  701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG  740

Query  702  CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG  775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG  814

Query  776  AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG  849
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG  888

Query  850  TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC  923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC  962

Query  924  CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC  997
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC  1036

Query  998  AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG  1071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG  1110

Query 1072  AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC  1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC  1184

Query 1146  CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG  1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG  1258

Query 1220  CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG  1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG  1332

Query 1294  AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG-  1366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1333  AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGG  1406

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1407  GTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTG  1480

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1481  CCGGGCCGGGCTCCACACCCCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCC  1554

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1555  CAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCACACC  1628

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1629  TGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGG  1702

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1703  GGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCC  1776

Query 1367  --------------------------------------------------------------------------  1366
                                                                                      
Sbjct 1777  GGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCA  1850

Query 1367  --------------------ATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCC  1420
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GACCACGGAGCCCCTGCCAAATAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCC  1924

Query 1421  AGCTCCTGGCTGGAGCCAGCCGGCACCAACT--------CCA------GAGACA--------------------  1460
            |||||||||||||||||||||||||||||||        |||      ||||||                    
Sbjct 1925  AGCTCCTGGCTGGAGCCAGCCGGCACCAACTGGTGAACGCCAGGCCGGGAGACAAGACCTGGGAGAGGCTGTGC  1998

Query 1461  CAAGATCAAGTGCTGCTTCCTATCAG-----------------------CTGGAGTCA---CTGCCCTGCTTGT  1508
            ||||.|||..|||.|..|....||||                       ||||.|.||   |||..|||.|||.
Sbjct 1999  CAAGGTCACCTGCAGGATGAGGTCAGAGGCAAGGCTGGGGCTGGGTCTCCTGGCGCCAGCTCTGGGCTGTTTGG  2072

Query 1509  CATCATCATCATCATCGC----CACCTCT-GTCCGAAAG-----------------------------------  1542
            |.|||.|    .|.|.||    ||||||| |||....||                                   
Sbjct 2073  CCTCAGC----CCTTGGCCCAGCACCTCTAGTCGCTGAGGGCAGCTAGGCCCAGGGGCCTCCAGGAGGCAGAAG  2142

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 2143  GTGATGGGCAGAAGGTGACGCCTGGTGACGGGCAAGGTGGACTCGCTGGAAACTCAGGGCCACACCACGCAGAA  2216

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 2217  GGCCTTGTTTCAAGAGGAAAGCCAGCCAGCAAGATGACCCCTCCTGAGCACCCTGGGATCACCTGGTCAGAAGC  2290

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 2291  AGCGCTGATGCCTGGGACGGCAGGAGGACGATGGGACAGTGAGGAAGAGGAGGAGGTGAAGGAGGAGGAGGAAA  2364

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 2365  GGAGGGCAGTGGCAACTGGGCCAGCCACCTGTGCCATGGACGCCGTGCCGCATTCCCAGTGAGCCTGTGGGCTC  2438

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 2439  AGTCCTGGCAGAGCAGGCACCGCCCCCCCGACACACTGCAGAGGAGCTGATGAGGAGGACGAGACCCCCAGCTG  2512

Query 1543  -----------------------------------------------------------  1542
                                                                       
Sbjct 2513  CTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAACCTGACCCCCTGG  2571