Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13424
- Subject:
- XR_001743233.2
- Aligned Length:
- 2753
- Identities:
- 543
- Gaps:
- 2210
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCCAGCCTCCCTCGGCCAAATTGCTGCGGAGCCCGTCGTCAGGGGGCGCCAAGGAGCCAGGGGGAAAACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGCGCTGACAGGAGCCTCCCGGCGGTGCTACCCTCCACCTCCCACCTCCCTGCGCCCCGCCCCGAGGTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTTTGAAGAATGCAGCCGGGGAAAGCATTAACTTTTGAGCTACGTCCAGAATAGCATCATCTTCATGGGTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCTACTCCTAGGATTTCAGAAAACCTTTGATAACTAATTGAGAAAATGCAGAAGATCGTGCAGACAGATGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTACCAATACACAAGCTTTTAGAAAAGGAAAGAGGAAAAGAACAGAGACAATGGACTCAGAAAATGCAAATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACATGGATAAAGGACAGAGAGACCCATATTCGGGAAATGCCTTTCTGCCTGGTGAAAGCTCCAGTGAGGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGCCTTTAGCAGAATTGTCAAAGGAAGAATTGTGCGCCAAAATAAAAAGCCTGAAAGAAAAACTAACAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCGGAAAGAAAACAGCCGACTTCGACAGTCTTTGGTCATGCTTCAAGGAAACAAACTAGATATAACAACAGA 592
Query 1 -----------------------------------ATGTTGTTACCACAAGCAGTCACCCAGTTTGAAGAATTG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAAGACCATTTTACATGGAGGCATGAAAACTTTGAATGTTGTTACCACAAGCAGTCACCCAGTTTGAAGAATTG 666
Query 40 GTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCCTCTGGAGAGCAAC 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCCTCTGGAGAGCAAC 740
Query 114 AAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGTTCACCAGTTTCCT 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGTTCACCAGTTTCCT 814
Query 188 TAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCAGATTGCCCGTTGTAAC 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCAGATTGCCCGTTGTAAC 888
Query 262 AAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAATACATGGCCACTCACAG 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAATACATGGCCACTCACAG 962
Query 336 CCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAATCAGAATGAAGTCCAAG 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAATCAGAATGAAGTCCAAG 1036
Query 410 AAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAGAATGATAGGGCAAAAG 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAGAATGATAGGGCAAAAG 1110
Query 484 CTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTAAA-------------- 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTAAATAGATCCTTTTGGT 1184
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1185 ATTACAGGTATCTGAAACAAAGCACCTTCAATTCTAAATCTAGCACTGGATTTTGTTGGAGAATCTGCAGCCTT 1258
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1259 CCTGGCAGTGAGAAAGACAGACATGTGCAGTGACAGGCTGTAAGACATATGTAACATTGCTGAGCTCTCCTAAG 1332
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1333 GGACCAACAAGCTTGCTGAAGAAGCTGCATGTAGATTCCACCCTCAGTACTAGTGATGCATCAAACCAGAGAAT 1406
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1407 TTCTGCCAGTCAAATAAGCATGCAATATGGTTTCTTTGGAAATAAGCATTTCCCAATCCCCAAATACCCCTCTG 1480
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1481 TACAGTTAATCTAACAGGATAGTCAGAGCTCTTATCATAGCAGCCAAAACTTCAGCCCATAGGTTAGTCATTGT 1554
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1555 CCTAACCAATCATTGTACATTGATTATTACCAGTGACTTCCCATTATAGTTTTTGGATCTTTAGCATAAGCACA 1628
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1629 TGCTTGCAAAAGTAAACAGTGAAATAATTAATGTTGGCAAATATGAGAACAACAAAGTCAGCCCAAAATCTGAT 1702
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1703 AATCATGTCTAACCAAGTAATAATGTTTTAGCAATAAAATTACAGGATTATTCTGTTATCTAAAAATGTATAAA 1776
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1777 ATGGGAATATGAAAAAAATGACAACAGCAAGATGTTTTATTTTAATGTTAAGCAATTCCACCACACTTCTGAAG 1850
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1851 AATAAACCTAAGTTTTTGTGATTGTTAAAACAATGCATCAATTTTCAGGGAAATCTTTTTGTTTGTTTATTTAC 1924
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1925 CAGACATGTTCTAACTTTGTATTGCCCAAAGTATATTAAATACAGATGTGTAATATAAAGCATCAATATCACCT 1998
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1999 AACACATCGTATATAAGATATAACATGATAGATAGTTGGTCGATTACATTGCTATACTGCTTAGTTTTAACTGG 2072
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2073 TTTATTTTTATTGTAGCAGAAATGAACTGAAAAAAAATATGGGTTTGATAATCACACACATGAAAGTACCATTT 2146
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2147 TGTAACTCAACAAAAGATAAAACATTCTTCATCAAAAGGCTTCTCGCTTGGTGTCAGGTTGTCACATGTGACCA 2220
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2221 CTGTGCAATGCGAAGCCATACTTCTTCAGTGCACAAAGTCATGTTTAAACTTGGAAAAGAGGATGCTACAGTAG 2294
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2295 TTTCAAAGTTCAGTGTTGTGGACCCAGGAAATTTTCCATAAGTCTTGCTTGATAACAATGTGATTGTACAAAAT 2368
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2369 AAATGTTCTTAAGGAAACAACTTATGTAACATTTGCTACCTTTATGTAAACATAAATAAATCCCATTTAAAAGA 2442
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2443 TAAAACTTATTTTCTTGTTTCTTTATTAATGCATAAAAATTAGGGAAATATTTTTTTCTAGGCTGATAGCTTTT 2516
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2517 TCACTCATCCATTAAGGCATTACCATTACGATTTGACTATGTAGCTCTGACTCATTTTTCTTGTAAAGAGCCAT 2590
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2591 GCTATGTAGGATATATAGACAACGTCCAGGAAAGTAAATACATTTAATATTTTTATTGAGAAAGGATAATCTTA 2664
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2665 CTAAGATGTATGCTATTTGCTTTATTAAAAATGCTACTTGATAATGTAAGTTTTGCCTACTAAAGGTAAATAAA 2738
Query 544 --------------- 543
Sbjct 2739 ATTACTTTTGCAAAA 2753
