Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13424
- Subject:
- XR_001743235.2
- Aligned Length:
- 2843
- Identities:
- 543
- Gaps:
- 2300
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCCAGCCTCCCTCGGCCAAATTGCTGCGGAGCCCGTCGTCAGGGGGCGCCAAGGAGCCAGGGGGAAAACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGCGCTGACAGGAGCCTCCCGGCGGTGCTACCCTCCACCTCCCACCTCCCTGCGCCCCGCCCCGAGGTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTTTGAAGAATGCAGCCGGGGAAAGCATTAACTTTTGAGCTACGTCCAGAATAGCATCATCTTCATGGGTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCTACTCCTAGGATTTCAGAAAACCTTTGATAACTAATTGAGAAAATGCAGAAGATCGTGCAGACAGATGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTACCAATACACAAGCTTTTAGAAAAGGAAAGAGGAAAAGAACAGAGACAATGGACTCAGAAAATGCAAATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACATGGATAAAGGACAGAGAGACCCATATTCGGGAAATGCCTTTCTGCCTGGTGAAAGCTCCAGTGAGGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGCCTTTAGCAGAATTGTCAAAGGAAGAATTGTGCGCCAAAATAAAAAGCCTGAAAGAAAAACTAACAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCGGAAAGAAAACAGCCGACTTCGACAGTCTTTGGTCATGCTTCAAGCAGGCTGTGCCCTCAACCATATAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGGAACTGAATTAGACAAGGTTCAAGATCTCTTCCAACTCCAACAACATGTTATTTGTCCTTAGGAAACAAAC 666
Query 1 ---------------------------------------------------ATGTTGTTACCACAAGCAGTCAC 23
|||||||||||||||||||||||
Sbjct 667 TAGATATAACAACAGAGAAGACCATTTTACATGGAGGCATGAAAACTTTGAATGTTGTTACCACAAGCAGTCAC 740
Query 24 CCAGTTTGAAGAATTGGTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCA 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGTTTGAAGAATTGGTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCA 814
Query 98 CCCTCTGGAGAGCAACAAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTCTGGAGAGCAACAAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCC 888
Query 172 AGTTCACCAGTTTCCTTAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCA 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTTCACCAGTTTCCTTAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCA 962
Query 246 GATTGCCCGTTGTAACAAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAAT 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GATTGCCCGTTGTAACAAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAAT 1036
Query 320 ACATGGCCACTCACAGCCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAAT 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACATGGCCACTCACAGCCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAAT 1110
Query 394 CAGAATGAAGTCCAAGAAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAG 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGAATGAAGTCCAAGAAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAG 1184
Query 468 AATGATAGGGCAAAAGCTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTA 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AATGATAGGGCAAAAGCTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTA 1258
Query 542 AA------------------------------------------------------------------------ 543
||
Sbjct 1259 AATAGATCCTTTTGGTATTACAGGTATCTGAAACAAAGCACCTTCAATTCTAAATCTAGCACTGGATTTTGTTG 1332
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1333 GAGAATCTGCAGCCTTCCTGGCAGTGAGAAAGACAGACATGTGCAGTGACAGGCTGTAAGACATATGTAACATT 1406
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1407 GCTGAGCTCTCCTAAGGGACCAACAAGCTTGCTGAAGAAGCTGCATGTAGATTCCACCCTCAGTACTAGTGATG 1480
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1481 CATCAAACCAGAGAATTTCTGCCAGTCAAATAAGCATGCAATATGGTTTCTTTGGAAATAAGCATTTCCCAATC 1554
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1555 CCCAAATACCCCTCTGTACAGTTAATCTAACAGGATAGTCAGAGCTCTTATCATAGCAGCCAAAACTTCAGCCC 1628
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1629 ATAGGTTAGTCATTGTCCTAACCAATCATTGTACATTGATTATTACCAGTGACTTCCCATTATAGTTTTTGGAT 1702
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1703 CTTTAGCATAAGCACATGCTTGCAAAAGTAAACAGTGAAATAATTAATGTTGGCAAATATGAGAACAACAAAGT 1776
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1777 CAGCCCAAAATCTGATAATCATGTCTAACCAAGTAATAATGTTTTAGCAATAAAATTACAGGATTATTCTGTTA 1850
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1851 TCTAAAAATGTATAAAATGGGAATATGAAAAAAATGACAACAGCAAGATGTTTTATTTTAATGTTAAGCAATTC 1924
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1925 CACCACACTTCTGAAGAATAAACCTAAGTTTTTGTGATTGTTAAAACAATGCATCAATTTTCAGGGAAATCTTT 1998
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1999 TTGTTTGTTTATTTACCAGACATGTTCTAACTTTGTATTGCCCAAAGTATATTAAATACAGATGTGTAATATAA 2072
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2073 AGCATCAATATCACCTAACACATCGTATATAAGATATAACATGATAGATAGTTGGTCGATTACATTGCTATACT 2146
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2147 GCTTAGTTTTAACTGGTTTATTTTTATTGTAGCAGAAATGAACTGAAAAAAAATATGGGTTTGATAATCACACA 2220
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2221 CATGAAAGTACCATTTTGTAACTCAACAAAAGATAAAACATTCTTCATCAAAAGGCTTCTCGCTTGGTGTCAGG 2294
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2295 TTGTCACATGTGACCACTGTGCAATGCGAAGCCATACTTCTTCAGTGCACAAAGTCATGTTTAAACTTGGAAAA 2368
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2369 GAGGATGCTACAGTAGTTTCAAAGTTCAGTGTTGTGGACCCAGGAAATTTTCCATAAGTCTTGCTTGATAACAA 2442
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2443 TGTGATTGTACAAAATAAATGTTCTTAAGGAAACAACTTATGTAACATTTGCTACCTTTATGTAAACATAAATA 2516
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2517 AATCCCATTTAAAAGATAAAACTTATTTTCTTGTTTCTTTATTAATGCATAAAAATTAGGGAAATATTTTTTTC 2590
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2591 TAGGCTGATAGCTTTTTCACTCATCCATTAAGGCATTACCATTACGATTTGACTATGTAGCTCTGACTCATTTT 2664
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2665 TCTTGTAAAGAGCCATGCTATGTAGGATATATAGACAACGTCCAGGAAAGTAAATACATTTAATATTTTTATTG 2738
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2739 AGAAAGGATAATCTTACTAAGATGTATGCTATTTGCTTTATTAAAAATGCTACTTGATAATGTAAGTTTTGCCT 2812
Query 544 ------------------------------- 543
Sbjct 2813 ACTAAAGGTAAATAAAATTACTTTTGCAAAA 2843
