Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13424
- Subject:
- XR_001743236.2
- Aligned Length:
- 2840
- Identities:
- 543
- Gaps:
- 2297
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTATCCAGCCTCCCTCGGCCAAATTGCTGCGGAGCCCGTCGTCAGGGGGCGCCAAGGAGCCAGGGGGAAAACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGCGCTGACAGGAGCCTCCCGGCGGTGCTACCCTCCACCTCCCACCTCCCTGCGCCCCGCCCCGAGGTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTTTGAAGAATGCAGCCGGGGAAAGCATTAACTTTTGAGCTACGTCCAGAATAGCATCATCTTCATGGGTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCTACTCCTAGGATTTCAGAAAACCTTTGATAACTAATTGAGAAAATGCAGAAGATCGTGCAGACAGATGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTACCAATACACAAGCTTTTAGAAAAGGAAAGAGGAAAAGAACAGAGACAATGGACTCAGAAAATGCAAATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACATGGATAAAGGACAGAGAGACCCATATTCGGGAAATGCCTTTCTGCCTGGTGAAAGCTCCAGTGAGGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGCCTTTAGCAGAATTGTCAAAGGAAGAATTGTGCGCCAAAATAAAAAGCCTGAAAGAAAAACTAACAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCGGAAAGAAAACAGCCGACTTCGACAGTCTTTGGTCATGCTTCAAGGCTGTGCCCTCAACCATATAGTGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAACTGAATTAGACAAGGTTCAAGATCTCTTCCAACTCCAACAACATGTTATTTGTCCTTAGGAAACAAACTAG 666
Query 1 ------------------------------------------------ATGTTGTTACCACAAGCAGTCACCCA 26
||||||||||||||||||||||||||
Sbjct 667 ATATAACAACAGAGAAGACCATTTTACATGGAGGCATGAAAACTTTGAATGTTGTTACCACAAGCAGTCACCCA 740
Query 27 GTTTGAAGAATTGGTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTTGAAGAATTGGTTGGTATGGCCGAGGCTCTGCTTAAGGGTGGGGGAACCATGTCTACATCTGCATCCACCC 814
Query 101 TCTGGAGAGCAACAAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGT 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCTGGAGAGCAACAAACAACTCCTCGCCAGATTCATTTGCCTCAACATGCAGTAATTCTAATTCTAACTCCAGT 888
Query 175 TCACCAGTTTCCTTAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCAGAT 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCACCAGTTTCCTTAAAGCCTGAGGAAGAGCATCAGACTGATGAGAAACAGTTCCAGATTGAAAAATGGCAGAT 962
Query 249 TGCCCGTTGTAACAAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAATACA 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCCCGTTGTAACAAGAGCAAGCCTCAGAAGTTTATTAATGATTTAATGCAAGTACTTTACACAAATGAATACA 1036
Query 323 TGGCCACTCACAGCCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAATCAG 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCCACTCACAGCCTGACAGGGGCAAAATCCTCTACTTCAAGGGACAAAGCTGTAAAACCAGCTATGAATCAG 1110
Query 397 AATGAAGTCCAAGAAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAGAAT 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AATGAAGTCCAAGAAATCATAGGAGTAACAAAACAATTATTTCCCAATACGGATGATGTTTCAATTAGGAGAAT 1184
Query 471 GATAGGGCAAAAGCTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTAAA- 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GATAGGGCAAAAGCTAAACAACTGTACCAAGAAGCCAAATTTAAGCAAAAATCTTAACTCTCAGGATATTAAAT 1258
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1259 AGATCCTTTTGGTATTACAGGTATCTGAAACAAAGCACCTTCAATTCTAAATCTAGCACTGGATTTTGTTGGAG 1332
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1333 AATCTGCAGCCTTCCTGGCAGTGAGAAAGACAGACATGTGCAGTGACAGGCTGTAAGACATATGTAACATTGCT 1406
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1407 GAGCTCTCCTAAGGGACCAACAAGCTTGCTGAAGAAGCTGCATGTAGATTCCACCCTCAGTACTAGTGATGCAT 1480
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1481 CAAACCAGAGAATTTCTGCCAGTCAAATAAGCATGCAATATGGTTTCTTTGGAAATAAGCATTTCCCAATCCCC 1554
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1555 AAATACCCCTCTGTACAGTTAATCTAACAGGATAGTCAGAGCTCTTATCATAGCAGCCAAAACTTCAGCCCATA 1628
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1629 GGTTAGTCATTGTCCTAACCAATCATTGTACATTGATTATTACCAGTGACTTCCCATTATAGTTTTTGGATCTT 1702
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1703 TAGCATAAGCACATGCTTGCAAAAGTAAACAGTGAAATAATTAATGTTGGCAAATATGAGAACAACAAAGTCAG 1776
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1777 CCCAAAATCTGATAATCATGTCTAACCAAGTAATAATGTTTTAGCAATAAAATTACAGGATTATTCTGTTATCT 1850
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1851 AAAAATGTATAAAATGGGAATATGAAAAAAATGACAACAGCAAGATGTTTTATTTTAATGTTAAGCAATTCCAC 1924
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1925 CACACTTCTGAAGAATAAACCTAAGTTTTTGTGATTGTTAAAACAATGCATCAATTTTCAGGGAAATCTTTTTG 1998
Query 544 -------------------------------------------------------------------------- 543
Sbjct 1999 TTTGTTTATTTACCAGACATGTTCTAACTTTGTATTGCCCAAAGTATATTAAATACAGATGTGTAATATAAAGC 2072
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2073 ATCAATATCACCTAACACATCGTATATAAGATATAACATGATAGATAGTTGGTCGATTACATTGCTATACTGCT 2146
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2147 TAGTTTTAACTGGTTTATTTTTATTGTAGCAGAAATGAACTGAAAAAAAATATGGGTTTGATAATCACACACAT 2220
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2221 GAAAGTACCATTTTGTAACTCAACAAAAGATAAAACATTCTTCATCAAAAGGCTTCTCGCTTGGTGTCAGGTTG 2294
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2295 TCACATGTGACCACTGTGCAATGCGAAGCCATACTTCTTCAGTGCACAAAGTCATGTTTAAACTTGGAAAAGAG 2368
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2369 GATGCTACAGTAGTTTCAAAGTTCAGTGTTGTGGACCCAGGAAATTTTCCATAAGTCTTGCTTGATAACAATGT 2442
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2443 GATTGTACAAAATAAATGTTCTTAAGGAAACAACTTATGTAACATTTGCTACCTTTATGTAAACATAAATAAAT 2516
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2517 CCCATTTAAAAGATAAAACTTATTTTCTTGTTTCTTTATTAATGCATAAAAATTAGGGAAATATTTTTTTCTAG 2590
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2591 GCTGATAGCTTTTTCACTCATCCATTAAGGCATTACCATTACGATTTGACTATGTAGCTCTGACTCATTTTTCT 2664
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2665 TGTAAAGAGCCATGCTATGTAGGATATATAGACAACGTCCAGGAAAGTAAATACATTTAATATTTTTATTGAGA 2738
Query 544 -------------------------------------------------------------------------- 543
Sbjct 2739 AAGGATAATCTTACTAAGATGTATGCTATTTGCTTTATTAAAAATGCTACTTGATAATGTAAGTTTTGCCTACT 2812
Query 544 ---------------------------- 543
Sbjct 2813 AAAGGTAAATAAAATTACTTTTGCAAAA 2840
