Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13425
- Subject:
- NM_001289021.3
- Aligned Length:
- 2274
- Identities:
- 794
- Gaps:
- 1479
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCACCAACAAGGGATTTATTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATAGATGAAGATGAAAAATTAATACCTAGCTTGGAAATCATCTTACCACGTGATTTGGCAGATGGGTTTGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAATAAGCGAGAAAGCTACAAATTTAAATTTCAAAGAATTTTTGATCAGGATGCAAACCAAGAGACCGTTTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAAACATTGCCAAACCAGTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACCATCTTTGCATATGGGCAAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCATACATTTTTGAACAGTTACAAAAGGACAGCAGCAAAATATATACAACACACATTTCCTATTTGGAAATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATACTGGAGGATCCTGATCAGAACATTCACCTGAAAAACTTGACTCTCCATCAGGCAACCACAGAGGAAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCTGAATTTGCTTTTTTTAGGAGACACCAACCGAATGATTGCAGAGACTCCTATGAACCAAGCTTCAACCCGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATCAACTTGTCACTACATTACTTAGAACAGGTTATCATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGACAACTATGATTGCAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCTATATCAACCTGCAGATTTGCACAGCGAGTGGCACTCATAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAATGAAGCTGTTCTTAATGAAGAAATTAACCCCAGATTAGTGATTAAACGCCTACAAAAGGAAATCCAGGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGAAGGATGAACTGGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAAAACTAATAACATCCTTTTTGGAAGACCAGGATTCAGACAGTAGATTAGAGGTTGGCGCGGATATGCGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGTTCATCACTGTTTTCATCATTTAAAGAAACTATTGAATGACAAGAAGATCCTTGAAAACAATACAGTCTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTGAAAGCAAAGACCAAGATTGTCAAGAACCATTAAAAGAAGAAGAATATAGAAAGCTACGAGATATTCTGAA 1406
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1407 ACAGAGAGATAACGAAATCAGTATCCTTTCTGAAGTGATGAAGAAACTTCCTCTATCCTGGTTTGAAAGGGGAA 1480
Query 2 TGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACC 1554
Query 76 ATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAAGTATAAATGAAGC 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAAGTATAAATGAAGC 1628
Query 150 AAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCAAGTAGCCCTAGGAATCTCGG 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCAAGTAGCCCTAGGAATCTCGG 1702
Query 224 AAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAAGAGA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAAGAGA 1776
Query 298 AGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA 1850
Query 372 AGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACGAACCTGCAGGTAAATTCTC 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1851 AGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAAATTCTC 1924
Query 446 CAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTCCCAACTC 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTCCCAACTC 1998
Query 520 CTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAA 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAA 2072
Query 594 TGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGG 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGG 2146
Query 668 AAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGACGGACTCGGACATCATC 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGACGGACTCGGACATCATC 2220
Query 742 GCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT 2274
