Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13425
Subject:
XM_005248904.4
Aligned Length:
2531
Identities:
787
Gaps:
1741

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCACCAACAAGGGATTTATTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CATAGATGAAGATGAAAAATTAATACCTAGCTTGGAAATCATCTTACCACGTGATTTGGCAGATGGGTTTGTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATAATAAGCGAGAAAGCTACAAATTTAAATTTCAAAGAATTTTTGATCAGGATGCAAACCAAGAGACCGTTTTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAAACATTGCCAAACCAGTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACCATCTTTGCATATGGGCAAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGTCATACATTTTTGAACAGTTACAAAAGGACAGCAGCAAAATATATACAACACACATTTCCTATTTGGAAATC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATACTGGAGGATCCTGATCAGAACATTCACCTGAAAAACTTGACTCTCCATCAGGCAACCACAGAGGAAGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCTGAATTTGCTTTTTTTAGGAGACACCAACCGAATGATTGCAGAGACTCCTATGAACCAAGCTTCAACCCGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATCAACTTGTCACTACATTACTTAGAACAGGTTATCATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGACAACTATGATTGCAAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCTATATCAACCTGCAGATTTGCACAGCGAGTGGCACTCATAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGAATGAAGCTGTTCTTAATGAAGAAATTAACCCCAGATTAGTGATTAAACGCCTACAAAAGGAAATCCAGGAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTGAAGGATGAACTGGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGAAAAACTAATAACATCCTTTTTGGAAGACCAGGATTCAGACAGTAGATTAGAGGTTGGCGCGGATATGCGTA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGTTCATCACTGTTTTCATCATTTAAAGAAACTATTGAATGACAAGAAGATCCTTGAAAACAATACAGTCTCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCTGAAAGCAAAGACCAAGATTGTCAAGAACCATTAAAAGAAGAAGAATATAGAAAGCTACGAGATATTCTGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACAGAGAGATAACGAAATCAATATCCTGGTCAACATGTTAAAAAAAGAAAAGAAGAAAGCTCAGGAGGCTCTCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACTTGGCTGGCATGGATAGACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCGCCTAGGAAACCCAGAAGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGTCAAAGAATGCGACTATCCTCAGCTCCCTCACAGGCCCAGGACTTCAGCATTTTGGGGAAAAGATCCAGTTT  1628

Query    1  -------------------ATGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGG  55
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCTCCACAAGAAAATAGGAATGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGG  1702

Query   56  ACCACGCTGACAGCGTTACCATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTG  129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACCACGCTGACAGCGTTACCATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTG  1776

Query  130  GGAGAAAGTATAAATGAAGCAAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCA  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GGAGAAAGTATAAATGAAGCAAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCA  1850

Query  204  AGTAGCCCTAGGAATCTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCAC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AGTAGCCCTAGGAATCTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCAC  1924

Query  278  AACTGGAGGAAGAAAAGAGAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCAC  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AACTGGAGGAAGAAAAGAGAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCAC  1998

Query  352  TTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGAGGAGGCCAC  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGAGGAGGCCAC  2072

Query  426  GAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCC  499
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCC  2146

Query  500  AGCATGAATGGTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGA  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGCATGAATGGTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGA  2220

Query  574  TTCGATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAG  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  TTCGATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAG  2294

Query  648  CAGCACCAGCACCCCACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCC  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  CAGCACCAGCACCCCACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCC  2368

Query  722  AGACGGACTCGGACATCATCGCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATGT-TTGGGAAGCAA  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| ||   .|||  
Sbjct 2369  AGACGGACTCGGACATCATCGCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATATCTT---CAGC--  2437

Query  795  T-------------------------------------------------------------------------  795
            |                                                                         
Sbjct 2438  TCCTTTGTTCTCTGTTCCCAAAGTCAGCTGTCTCCTCTGCTCAGGCTTCTACAAACAGGAAGGGGCTGAGTGAT  2511

Query  796  ---------------  795
                           
Sbjct 2512  GTTTTGGTAACTCGT  2526

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