Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13440
- Subject:
- XM_006504707.2
- Aligned Length:
- 1565
- Identities:
- 958
- Gaps:
- 463
Alignment
Query 1 ATGGGCTCCGTGGGGAGCCAGCGCCTTGAGGAGCCCAGCGTGGCAGGCACACCAGACCCGGGCGTAGTGATGAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTTCACCTTCGACAGTCACCAGCTGGAGGAGGCGGCGGAGGCGGCTCAGGGCCAGGGCCTTAGGGCCAGGGGCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCCCAGCTTTCACGGATACTACATTGGACGAGCCAGTGCCCGATGACCGTTATCACGCCATCTACTTTGCGATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTGCTGGCTGGCGTGGGCTTCCTGCTGCCATACAACAGCTTCATCACGGACGTGGACTACCTGCATCACAAGTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCAGGGACCTCCATCGTGTTTGACATGAGCCTCACCTACATCTTGGTGGCACTGGCAGCTGTCCTCCTGAACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACGTCCTGGTGGAGAGACTGACCCTGCACACCAGGATCACCGCAGCATCTGCGACGTGTGGCTGCAGCTCTTCT 444
|.|||||||||||||||||||
Sbjct 1 -----------------------------------------------------ATGTGTGGCTGCAGCTCTTCT 21
Query 445 CTCGGGACCAGGCCTACGCCATCAACCTGGCCGCTGTGGGCACCGTGGCCTTCGGCTGCACAGCAATCCAGCTT 518
|||..||||||||.||||||||||||||||||||.||||||||.||||||||.||.||||||||||||.|||||
Sbjct 22 CTCACGACCAGGCTTACGCCATCAACCTGGCCGCCGTGGGCACTGTGGCCTTTGGTTGCACAGCAATCTAGCTT 95
Query 519 CTACGGGTACACGGGGATGCTGCCCAAGCGGTACACGCAGGGGGTGATGACCGGGGAGAGCACGGCGGGCGTGA 592
|||.||.||||||||..|.|||||||||.|||||||||||||.||||||||.||.|||||||||||.||.||||
Sbjct 96 CTATGGCTACACGGGATTACTGCCCAAGAGGTACACGCAGGGTGTGATGACTGGAGAGAGCACGGCAGGGGTGA 169
Query 593 TGATCTCTCTGAGCCGCATCCTCACGAAGCTGCTGCTGCCCGACGAGCGCGCCAGCACGCTCATCTTCTTCCTG 666
|||||||||||||.||.||||||||.|||||||||||.||.||||||||.||||||||..||||||||||||||
Sbjct 170 TGATCTCTCTGAGTCGAATCCTCACTAAGCTGCTGCTCCCGGACGAGCGGGCCAGCACCATCATCTTCTTCCTG 243
Query 667 GTGTCGGTGGCG--CTGGAGCTGCTGTGTTTCCTGCTGCACCTGTTAGTGCGGCGCAGCCGCTTCGTGCTCTTC 738
||||| ||.|| .|||||||.|||||.|||||||||||.|||.|.||||||||||||||.||.|||||||.|
Sbjct 244 GTGTC--TGCCGGCTTGGAGCTCCTGTGCTTCCTGCTGCATCTGCTGGTGCGGCGCAGCCGTTTTGTGCTCTAC 315
Query 739 TATACCACACGGCCGCGTGACAGCCACCGGGGCAGGCCAGGCCTGGGCAGGGGCTATGGCTACCGCGTGCACCA 812
||||||||.|||||.||||||||||.|| |.|.|||||| .||||||||.||||||||
Sbjct 316 TATACCACTCGGCCCCGTGACAGCCGCC----CCGTCCAGGC--------------AGGCTACCGAGTGCACCA 371
Query 813 CGACGTTGTCG---CCGGGGACGTCCACTTCGAGCACCCAGCCCCGGCCCTGGCCCCCAACGAGTCCCCAAAGG 883
||| ||||| ||||.|||.|||||||.|||||||.|.|.||.|||||..||..||.|..||||||.||||
Sbjct 372 CGA---TGTCGCATCCGGAGACATCCACTTTGAGCACCAAACTCCAGCCCTATCCAGCAGCAGGTCCCCGAAGG 442
Query 884 ACAGCCCAGCCCACGAGGTGAC---CGGCAGCGGCGGGGCCTACATGCGCTTTGACGTGCCGCGGCCAAGGGTC 954
|.|||||.|||||.|||||||| |.|||.|.|.||||.|||||||||.|||||.|||||.||||||.|.|||
Sbjct 443 AGAGCCCGGCCCATGAGGTGACGCACAGCAACAGTGGGGTCTACATGCGTTTTGATGTGCCCCGGCCACGAGTC 516
Query 955 CAGCGCAGCTGGCCCACCTTCAGAGCCCTGTTACTGCACCGCTACGTGGTGGCGCGGGTGATCTGGGCCGACAT 1028
.|.||.||||||||||||||||||||||||.|..|||||||.|||||.|||||||||||.||||||||||||||
Sbjct 517 AAACGAAGCTGGCCCACCTTCAGAGCCCTGCTGTTGCACCGATACGTCGTGGCGCGGGTCATCTGGGCCGACAT 590
Query 1029 GCTCTCCATCGCCGTGACCTACTTCATCACGCTGTGCCTGTTCCCCGGCCTCGAGTCTGAGATCCGCCACTGCA 1102
|||.|||||.||.||.|||||||||||.||.|||||||||||.||.|||||.|||||.|||||||||||||||.
Sbjct 591 GCTGTCCATTGCGGTAACCTACTTCATTACACTGTGCCTGTTTCCGGGCCTGGAGTCCGAGATCCGCCACTGCG 664
Query 1103 TCCTGGGCGAGTGGCTGCCCATCCTCATCATGGCTGTGTTCAACCTGTCAGACTTCGTGGGCAAGATCCTGGCA 1176
|.|||||.|||||||||||||||||..|.|||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 665 TGCTGGGGGAGTGGCTGCCCATCCTGGTGATGGCCGTGTTCAACCTGTCAGACTTTGTGGGCAAGATCCTGGCA 738
Query 1177 GCCCTGCCCGTGGACTGGCGGGGCACCCACCTGCTGGCCTGCTCCTGCCTGCGTGTGGTCTTCATCCCCCTCTT 1250
||||||||||||||.|||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||
Sbjct 739 GCCCTGCCCGTGGAGTGGCGGGGCACTCACCTGCTCGCCTGCTCTTGCCTGCGTGTGGTCTTCATCCCCCTCTT 812
Query 1251 CATCCTGTGCGTCTACCCCAGCGGCATGCCCGCCCTCCGTCACCCCGCCTGGCCCTGCATCTTCTCACTGCTCA 1324
|||||||||.||.||||||||.||||||||.||||||||.|||||.|||||||||||..|||||||.|||||.|
Sbjct 813 CATCCTGTGTGTGTACCCCAGTGGCATGCCTGCCCTCCGCCACCCTGCCTGGCCCTGTGTCTTCTCGCTGCTAA 886
Query 1325 TGGGCATCAGCAACGGCTACTTCGGCAGCGTGCCCATGATCCTGGCGGCAGGCAAAGTGAGCCCCAAGCAGCGG 1398
|||||||||||||.||||||||.|||||.|||||||||||||||||.||.||.|||||||||||||||||||||
Sbjct 887 TGGGCATCAGCAATGGCTACTTTGGCAGTGTGCCCATGATCCTGGCAGCTGGAAAAGTGAGCCCCAAGCAGCGG 960
Query 1399 GAGCTGGCAGGGAACACCATGACCGTGTCCTACATGTCAGGGCTGACGCTGGGGTCCGCCGTGGCCTACTGCAC 1472
||.||||||||.|||||||||||.||||||||||||||.||||||||.|||||.||.||.||||||||||||||
Sbjct 961 GAACTGGCAGGAAACACCATGACTGTGTCCTACATGTCGGGGCTGACCCTGGGCTCTGCTGTGGCCTACTGCAC 1034
Query 1473 CTACAGCCTCACCCGCGACGCTCACGGCAGCTGCCTGCA---------CGCCTCCACCGCCAATGGTTCCATCC 1537
|||||||||||||||.||.||.||||||||||||.|.|| ||||.||.|||||||.|..|||||||
Sbjct 1035 CTACAGCCTCACCCGAGATGCCCACGGCAGCTGCTTTCAAACAGCCACCGCCGCCGCCGCCAACGACTCCATCC 1108
Query 1538 TCGCAGGCCTC 1548
..|..||.|.|
Sbjct 1109 CTGTCGGTCCC 1119
