Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13473
- Subject:
- XM_006504871.3
- Aligned Length:
- 2601
- Identities:
- 1531
- Gaps:
- 942
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACAGTGGCGGCGGCGGTGGCCTCCCGCCGCCCTCGGCCGCTGCCTCGCCGTCGTCGTCCTCGCTGGCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGTGGCGGTGGCGGTGGCGGCCTCGTCGGGCGTCGGGGGCGTCCCCGGCGGGCCGGCGGCGGCGGCGGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAGCTCAAGTACTGCCGCTACTACGCCAAGGACAAGACGTGCTTCTACGGCGAGGAGTGTCAGTTCCTGCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGACCCAGCCGCCTTTCCTCCGGGAGCGCTCCCGGGCGGGGGAGCGGGGCCGCCCGCGGGGCCCAAGAAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGCTGGGCGTCCCGGGGGCGGCGACCGCGGGCGGCGGACTCGATGGCCCGCGGGTGGCGATTCCGGGAATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGAGGTGCTTTAACTGATGCGAGTCTCACAGAGTCCTATTTCAGCACCAGCTTTATTGGAGTCAATGGATTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAAGCCCTGTAGAAACAAAGTATCCCTTGATGCAGAGAATGACTAGTAGTAGCAGCTCCCCAAGCCTTCTAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACAGTGCCAAGCCATACACAGGCCACGATCTTCTGACTTCATCTGCTTCATCCTTGTTTAATGACTTCGGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCTCAACATCTCCCAGAGAAGGAAGCCAAGGAAGTATCGCCTGGGGATGCTGGAGGAGAGGCTAGTTCCGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGATCACAGGCACGAAAAGCAAAGAACCCTCTTGGCTGCCTTGCTGACAGGTGTGAGTCAGGAGTGCCCGTCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATGGTTTGGTGGGACAGAGTCCCAGAAAACAATTTACAGACACCAAATCCTACTGCAAGCGAATTTATACCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGAGGATCAACCTCCAGGCTGAGTAACGTGTCCCAGTCAAATATGTCTGCCTTCTCTCAAGTTTTCTCTCAC 888
Query 1 ------------------------------------------ATGTCGTTGTCTGCTGGGTCTTCCCCTCTTCA 32
|||||..||||||||||.|||||||||||.||
Sbjct 889 CCATCCATGGGAAGTCCTGCTACTGCTGGATTAGCACCAGGAATGTCACTGTCTGCTGGATCTTCCCCTCTCCA 962
Query 33 TTCCCCCAAGATTACTCCACATACTTCTCCTGCTCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACA 106
|||||||||.|||||||||||.||.|||||||||||.|||||||||||.|||||||||||.||||||||||.||
Sbjct 963 TTCCCCCAAAATTACTCCACACACCTCTCCTGCTCCTAGAAGAAGAAGCCACACTCCAAACCCAGCAAGTTTCA 1036
Query 107 TGGTGCCTTCTAGTGCCTCTACATCTGTTAATAATCCTGTTTCTCAGACTCCGTCTTCTGGTCAGGTGATCCAA 180
|||||||..||||||||||.||..|||..|||||.||||.|.|||||.|||||||.|||||||||||||||||.
Sbjct 1037 TGGTGCCGCCTAGTGCCTCCACTCCTGCCAATAACCCTGCTCCTCAGCCTCCGTCCTCTGGTCAGGTGATCCAG 1110
Query 181 AAGGAAACTGTTGGTGGGACGACTTACTTCTATACAGACACAACTCCAGCACCTTTGACTGGAATGGTGTTTCC 254
|||||.|||||.||.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||.|||||
Sbjct 1111 AAGGAGACTGTCGGGGGGACGACTTACTTCTATACAGATACAACCCCAGCACCTTTGACTGGAATGGTATTTCC 1184
Query 255 AAACTATCATATTTATCCCCCAACTGCACCTCACGTTGCTTATATGCAACCGAAAGCAAACGCACCTTCCTTCT 328
||||||||||||||||||.|||||.||||||||.|||||||||||||||||.||||||||.|||||||||||||
Sbjct 1185 AAACTATCATATTTATCCTCCAACCGCACCTCATGTTGCTTATATGCAACCAAAAGCAAATGCACCTTCCTTCT 1258
Query 329 TCATGGCTGATGAACTCCGACAGGAGCTGATCAACAGACATTTAATAACAATGGCTCAAATTGATCAAGCAGAT 402
|||||||.||.||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||
Sbjct 1259 TCATGGCCGACGAGCTCCGACAGGAGCTGATCAACAGACATTTAATAACGATGGCTCAAATTGACCAAGCAGAT 1332
Query 403 ATGCCAGCAGTTCCTACAGAGGTTGACAGCTACCATAGCCTATTCCCTCTAGAACCACTGCCACCTCCCAACCG 476
|||||||||||.||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1333 ATGCCAGCAGTCCCCACAGAAGTTGACAGCTACCATAGCCTGTTCCCTCTAGAACCACTGCCACCTCCCAACCG 1406
Query 477 GATACAGAAATCAAGTAATTTTGGATATATTACATCTTGCTACAAAGCTGTAAACAGCAAAGATGATCTGCCAT 550
||||||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||||||||||
Sbjct 1407 GATACAGAAATCAAGTAATTTTGGATATATCACGTCTTGCTACAAAGCTGTAAATAGCAAAGATGATCTGCCAT 1480
Query 551 ATTGCCTTCGGAGGATACATGGTTTTCGTCTTGTTAACACAAAGTGCATGGTGTTGGTCGACATGTGGAAGAAA 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||.|||
Sbjct 1481 ATTGCCTTCGGAGGATACATGGTTTTCGTCTTGTTAACACAAAGTGCATGGTGTTGGTTGATATGTGGAAAAAA 1554
Query 625 ATTCAACACTCAAATATCGTAACTTTGCGTGAAGTATTTACCACTAAAGCATTTGCTGAGCCCTCTCTTGTGTT 698
|||||.|||||||||||.||||||.||||||||||.||||||||||||||||||||.|||||.|||||.|||||
Sbjct 1555 ATTCAGCACTCAAATATTGTAACTCTGCGTGAAGTGTTTACCACTAAAGCATTTGCCGAGCCTTCTCTGGTGTT 1628
Query 699 TGCATATGATTTCCATGCTGGAGGAGAAACTATGATGAGCAGACACTTTAATGACCCTAATGCTGATGCCTACT 772
.||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||.||||||||||||
Sbjct 1629 CGCCTATGATTTCCATGCTGGAGGAGAAACTATGATGAGCAGACACTTTAACGACCCGAATTCTGATGCCTACT 1702
Query 773 TCACCAAGAGAAAGTGGGGTCAGCACGAGGGACCATTGCCCAGGCAGCATGCTGGATTATTGCCAGAATCTCTT 846
||||.|||||.||||||||.||||||||.||||||.||||||||||||||||||||||.||.|||||.|||||.
Sbjct 1703 TCACAAAGAGGAAGTGGGGCCAGCACGATGGACCACTGCCCAGGCAGCATGCTGGATTGTTACCAGAGTCTCTC 1776
Query 847 ATTTGGGCATATATTGTCCAACTAAGTTCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTAT 920
||.||||||||.|||||.||.||.||||||||..||||.|||||||||||||||||||||||.|||.||||.||
Sbjct 1777 ATCTGGGCATACATTGTACAGCTGAGTTCTGCTCTGCGGACCATTCATACAGCAGGTTTGGCCTGTAGAGTAAT 1850
Query 921 GGATCCAACAAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATTGTGTTGGAGTTTTTGATGTTTTAA 994
|||.|||||.||||||||||||||..|||||||||||||.||||||||||||||.|||||.|||||||||||||
Sbjct 1851 GGACCCAACGAAGATTCTGATAACCAGCAAAACAAGGTTACGAGTAAATTGTGTAGGAGTCTTTGATGTTTTAA 1924
Query 995 CATTTGATAACAGTCAAAATAATAATCCATTGGCATTAATGGCCCAGTACCAGCAAGCAGATCTGATATCATTA 1068
||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1925 CATTTGATAACAGTCAAAATAATAATCCTTTGGCATTAATGGCTCAGTACCAGCAAGCAGATCTGATATCATTA 1998
Query 1069 GGAAAAGTTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAATTCAGCGAGAGAATTTACAGAAAGCCATGGA 1142
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1999 GGAAAAGTTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAATTCAGCGAGAAAATTTACAGAAAGCCATGGA 2072
Query 1143 ACTGGTGACAATCAACTATTCCTCTGACCTGAAGAATCTGATTTTGTATTTGTTGACTGACCAAAACAGGATGC 1216
|.||||||||||||||||.|||||||||||||||||.||.||.|||||.|||||||||||||||||||||||||
Sbjct 2073 ATTGGTGACAATCAACTACTCCTCTGACCTGAAGAACCTCATCTTGTACTTGTTGACTGACCAAAACAGGATGC 2146
Query 1217 GAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTCAAATGAGAAAT 1290
|.|||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||
Sbjct 2147 GGAGTGTGAATGACATCATGCCCATGATTGGTGCTCGGTTTTACACTCAATTGGATGCTGCTCAAATGAGAAAT 2220
Query 1291 GATGTCATAGAGGAAGACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTTTAGGCTCCTAGCAAAATTGGGAAC 1364
|||||.||.||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 2221 GATGTTATCGAGGAAGACCTTGCTAAGGAGGTTCAAAATGGAAGACTGTTTAGGCTTCTAGCAAAATTGGGAAC 2294
Query 1365 AATCAATGAGAGGCCGGAGTTTCAGAAGGATCCCACTTGGTCAGAGACTGGAGACCGTTATCTGTTGAAACTCT 1438
||||||.||||||||||||||||||||||||||.||.||||||||||||||||||.|.||.|||||||||||||
Sbjct 2295 AATCAACGAGAGGCCGGAGTTTCAGAAGGATCCAACCTGGTCAGAGACTGGAGACAGATACCTGTTGAAACTCT 2368
Query 1439 TTAGGGATCATCTTTTTCATCAGGTGACAGAAGCAGGTGCTCCCTGGATTGACCTCAGTCATATAATTTCTTGT 1512
||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 2369 TTAGAGATCATCTTTTTCATCAGGTGACAGAAGCAGGTGCTCCCTGGATCGACCTCAGTCACATCATTTCTTGT 2442
Query 1513 CTTAACAAGCTAGATGCTGGTGTGCCAGAAAAAATAAGCCTGATTTCCAGAGATGAGAAGAGTGTACTTGTGGT 1586
|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||.||.|||||
Sbjct 2443 CTTAACAAGCTAGATGCTGGTGTGCCAGAAAAAATCAGCCTGATTTCCAGAGACGAGAAGAGCGTGCTGGTGGT 2516
Query 1587 GACCTACAGTGACTTAAAGCGCTGCTTTGAAAATACTTTTCAAGAACTGATTGCAGCTGCAAATGGT------- 1653
|||.|||||||||.||||.|||||||||||||||||.|||||||||||||||||.||||||||||||
Sbjct 2517 GACATACAGTGACCTAAAACGCTGCTTTGAAAATACCTTTCAAGAACTGATTGCGGCTGCAAATGGTAACGATC 2590
Query 1654 ----CAGTTG- 1659
||||..
Sbjct 2591 GGAACAGTAAC 2601
