Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13478
Subject:
XM_017014588.1
Aligned Length:
1743
Identities:
1660
Gaps:
75

Alignment

Query    1  ATGATCCACTTTCGGAGCTCCAGCGTCAAATCGCTCAGCCAGGAGATGAGATGCACCATCCGGCTGCTGGACGA  74
                                                                           .|||||.| .|
Sbjct    1  ---------------------------------------------------------------ATGCTGCA-AA  10

Query   75  CTCGGAGATCTCCTGCCACATCCAGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACA  148
            ||||.|      ||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   11  CTCGCA------CTGCCA-----AGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACA  73

Query  149  GCCTGCTGGAGAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   74  GCCTGCTGGAGAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAAC  147

Query  223  AAGTCCATCTTCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  AAGTCCATCTTCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGA  221

Query  297  ACCCTTGAAGATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  222  ACCCTTGAAGATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCC  295

Query  371  ACCTGCTGTGCTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGAT  444
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  GCCTGCTGTGCTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGAT  369

Query  445  CCTAATGAGCATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAA  518
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  CCTGATGAGCATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAA  443

Query  519  AATAGTGGAAATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  AATAGTGGAAATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAG  517

Query  593  CTCACACTTTGGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  CTCACACTTTGGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGA  591

Query  667  TTCACAGCTGCAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  TTCACAGCTGCAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAA  665

Query  741  ATTGAAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCAATA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  666  ATTGAAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCCATA  739

Query  815  CTTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAAAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  740  CTTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAAAA  813

Query  889  TCCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAAAGT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  TCCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAAAGT  887

Query  963  TGCCAAAGAGGTGGTGGAGGCCAGTTCCAAGATCCAGAGGGAGCCTCCTGAGGTGCACAGAGCCAACATTACTC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  TGCCAAAGAGGTGGTGGAGGCCAGTTCCAAGATCCAGAGGGAGCCTCCTGAGGTGCACAGAGCCAACATTACTC  961

Query 1037  AGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATGGAACCCCTGCAGCCCCTGCTTCCTTCC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  AGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATGGAACCCCTGCAGCCCCTGCTTCCTTCC  1035

Query 1111  CCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTAAAGAGGAGAACATTTCTGCTCC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  CCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTAAAGAGGAGAACATTTCTGCTCC  1109

Query 1185  CTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAGTGAAGAGGAAGATAAAATAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  CTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAGTGAAGAGGAAGATAAAATAA  1183

Query 1259  AAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCACCCCTGTGGATGAC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  AAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCACCCCTGTGGATGAC  1257

Query 1333  GATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACAGATTCATTTGAGGA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  GATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACAGATTCATTTGAGGA  1331

Query 1407  TCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCGCCGTGCTTTGTCGT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  TCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCGCCGTGCTTTGTCGT  1405

Query 1481  GGAGCTACGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCAGGCTCCTTGTGGTG  1554
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  GGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCAGGCTCCTTGTGGTG  1479

Query 1555  GGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGGTATTGATCTCTCCTTCTT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  GGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGGTATTGATCTCTCCTTCTT  1553

Query 1629  ATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTACTGTCCCCTCAAGGAGTGGGTGG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554  ATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTACTGTCCCCTCAAGGAGTGGGTGG  1627

Query 1703  CTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA  1743
            |||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  CTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA  1668

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