Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13512
Subject:
XM_006534446.3
Aligned Length:
3297
Identities:
1329
Gaps:
1848

Alignment

Query    1  ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct    1  ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCACATCCGGTTCAAACTGGCTCCCCC  74

Query   75  ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA  148
            ||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||
Sbjct   75  ATCCTCCACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAATATTCTTATTTCTGCCAACGGAACCA  148

Query  149  AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG  222
            |||||||||||||||||||.|||||||||||.|||||.|||||.|||||||||||.||||||||||||||||||
Sbjct  149  AAAGAAAAGCCATTGCTGCGGAGGATCCCAGTCTAGACTTCCGCAATAATCCTACTAAGGAAGACTTGGGAAAG  222

Query  223  CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA  296
            |||||.|||.|||||||||||||||||||||||||||||||||||||||||.||||.|||||||||||.|||||
Sbjct  223  CTGCAGCCATTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCGCAAAAGAGTCTTTGAAATTGCA  296

Query  297  AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC  370
            |||.||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||
Sbjct  297  AGGCGTTTTCAGCAAGCAGACAGTCCTTAAGTCTCATCCTCTTTTATCTCAGTCCTATGAACTCCGAGCTGAGC  370

Query  371  TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT  444
            ||.|||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||
Sbjct  371  TGCTGGGGAGGCAGCCAGTTTTGGAGTTTTCCTTAGAAAACCTTAGAACCATGAATACAAGTGGTCAGACAGCT  444

Query  445  CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC  518
            |||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  445  CTGCCACAAGCGCCTGTAAATGGATTGGCTAAGAAATTGACTAAAAGTTCAACACATTCGGATCATGACAATTC  518

Query  519  CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT  592
            ||.||||||||||||||||||||||.||||||||||.||..||||.||.||.|||||..||||.|||.||||.|
Sbjct  519  CAGTTCCCTCAATGGGGGAAAACGGTCTCTCACTTCGTCATCTCTACAAGGTGGTGAGGTGGGGGGACCTGACT  592

Query  593  CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG  666
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.|.
Sbjct  593  CTGGGAACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATATACAACACACAACTCTA  666

Query  667  TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG  740
            |||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct  667  TATAGCAATAATAGCACTGCAAACAAATCTTCTGTTAATTCCATGGACCAGCCGGCACTTCAAGGAAGCAGCAG  740

Query  741  ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT  814
            .|||||||||.|||||||||||||||||||||||.....|||.||.||.||.|..|||||||||||.|||||||
Sbjct  741  GTTATCACCTAGTACAGACTCCAGCTCTAACTTGACAAATGTGAAGTTAGAAGTCAAAAAGTCTCCTCTGTCTT  814

Query  815  CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC  888
            ||||||||||||||||||||||.|||||.|||||||||||||||||||||.||||.||||||||.|||||||.|
Sbjct  815  CCATTCTTTTCAGTGCTTTAGACTCTGATACAAGGATAACAGCTTTACTGAGGCGGCAGGCTGATATTGAGATC  888

Query  889  CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT  962
            ||||||||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||.||||.||.||.||
Sbjct  889  CGTGCCCGAAGGTTACAGAAGCGATTACAGGTTGTGCAAGCCAAGCAGGTGGAGAGACATTTACAGCACCAACT  962

Query  963  GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC  1036
            |||||||||||||||||.|||.|||||.|||||||||||||||||||||||.||..|.|||||||||||||||.
Sbjct  963  GGGTGGATTTTTGGAGACGACATTGAGTAAACTGCCAAACTTGGAATCCTTAAGGTCCCGGAGCCAGTTGATGT  1036

Query 1037  TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT  1110
            ||||.|||||||||||||||||||||||||||||||||||||||.|..||||||||||||||||||||||||||
Sbjct 1037  TGACCCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGTCTGCCACTTCAGAGGGACTTAGCAACTTT  1110

Query 1111  CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA  1184
            .|||||||..||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1111  TTGAAAAGTGATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACCTGAGGTGCAGTGA  1184

Query 1185  ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA  1258
            .||.||.||||||||.||||||||.|||||||||||.||||||||||||||.||||||||||||||||||||..
Sbjct 1185  GCAAGCGTTTGATTCGGATGTCACAGACAGTAGTTCCGGAGGGGAGTCTGACATTGAAGAGGAAGAACTGACTC  1258

Query 1259  GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT  1332
            ||||||||||.|||||..|.|||||.|||||||.|||.|||||.|||||||.|||||||||||||||.||||||
Sbjct 1259  GAGCTGATCCTGAGCAATGCCATGTGCCCCTGAAACGTAGGTCTGAATGGAGATGGGCTGCAGACCGAGCAGCT  1332

Query 1333  ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT  1406
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1333  ATTGTCAGCCGCTGGAACTGGCTTCAGGCCCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGATAT  1406

Query 1407  TTACAAACAGATACGTGCTAATAA--GGTT-----TCTGTGTGGAGACAG------------------------  1449
            ||||||||||||||||||||||||  ||||     ||..||.||||.||.                        
Sbjct 1407  TTACAAACAGATACGTGCTAATAAGGGGTTGATAGTCCTTGGGGAGGCACCTTTCCCAGATCATACAACAGACT  1480

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1481  TACTTTCACTTAGTTCTGAGGTGAAGACAGATCATGGGAGAGATAAATTGATTGAGTCTGTTTCTCAGCCATCA  1554

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1555  GAAAACCATGGTATCCTTGTTAGTAATATTACAGAGTCATTGTCTACCAAATCATGTGGAGCACCGCGACCTGT  1628

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1629  CAATGGAGTTGTTAACAGTCTTCAGCCTGTCCTGGCAGACCAAGTTCCAGGTGACAGCTCTGATGCTGAGGAAC  1702

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1703  AATTACATAAAAAGCAAAGGCTGAATTTAGTTTCTTCATCTGATGGCACGTGTGTCGCAGCCCGAACCCGGCCT  1776

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1777  GTACTGACCTGTAAGAAACGGAGGCTTGTTAGGCCCAGCAGCATCGTTCCTCTTTCTAAGAAGGTTCACCGTAA  1850

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1851  TGTCCGCTCTGGCTGTGATGTGAATCCCTCTTGTGCACTGTGTGGTTCAGGCAGTGTGAACACCATGCCTCCTG  1924

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1925  AAATACACTATGAAGCACCTCTCTTAGAGCGTCTTTCCCAGTTGGACTCCTGCGTTCACCCTGTGCTAGCATTT  1998

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1999  CCAGATGATGTTCCCACAAGCCTGCACTTCCAGAGCATGCTGAAGTCTCAGTGGCAAAACAAGCCTTTTGACAA  2072

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2073  GATCAAACCTACCAAAAAGTTTTCTCTTAAGCACAGAGCGACCATGCCATGCAGTCTGTCAGATCCAGTTCGTA  2146

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2147  AAGACAGACACAAGTTGGTCAACTCCTTCCTTACAACAGCCAAGCTGTGCCATCAGCAAACACGGCCTGACAGG  2220

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2221  ACCCACAGGCAGCACTTAGACGGCGTGGGGGCTGTGCCCATGGTGGAGCGAGTGACAGCTCCAAAAGCAGAGCG  2294

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2295  CTTGCTCCACCTGCCGCCACCTGTGCATGACCCCACCCACAGCAAAATGAGATTGCGAGATCATTCATCTGAGA  2368

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2369  GAAGTGAAGTGTTGAAGCATCACACAGACATGAGCAGTCCGAGCTACTTGACAGCTACCCACCATCCACCCCAC  2442

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2443  AGCCCCCTGGTGAGACAGCTCTCCACCTCATCAGACACCTCCACACCCACCAGCTCGGGCTCACAAGTTGCAGC  2516

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2517  CAGCACATCTCAGCCAGTGAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACAACATTGTCATCCCAATGT  2590

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2591  CTGTTGCTGCAACAACTCGTGTTGAGAAACTACAATACAAAGAAATCCTTACTCCAAGCTGGCGAGAGGTTGAT  2664

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2665  GTTCAGTCTCTGAAGGGGAGTCCTGATGAAGAGAATGAGGAGATCGAGGACCTATCTGATGCAGCCTTTGCGGC  2738

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2739  CCTGCATGCCAAATGTGAGGAGATGGAAAGGGCAAGGTGGCTGTGGACCACAAGTGTGCCACCCCAGCGTCGGG  2812

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2813  GCAGCAGGTCTTACAGGTCATCAGACGGCCGGACCACCCCTCAGTTGGGCAGTGCCAACCCCTCCACCCCACAG  2886

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2887  CCTGCGTCCCCTGATGTCAGTAGTAGCCACTCTCTGTCAGAATTCTCCCATGGTCAATCTCCTAGGAGTCCCAT  2960

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2961  TAGCCCAGAACTACACTCAGCCCCTCTCACCCCTGTGGCTCGGGACAGTCTGCGACACCTGGCCAGTGAAGACA  3034

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 3035  CCCGATGTTCCACACCAGAGCTGGGACTAGATGAACAGTCAGTCCAGCCATGGGAACGACGGACCTTCCCTCTG  3108

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 3109  GCCTACAGTCCCCAGGCAGAATGTGAGGAGCAGCTGGATGCACAGGACACGGCAGCCCGCTGCACTCGCCGCAC  3182

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 3183  CTCAGGCAGCAAGACTGGCCGGGAGGCAGAGGTGGCACCCACCTCGCCTCCTGTTGTCCCGCTCAAGAGTCGGC  3256

Query 1450  -----------------------------------------  1449
                                                     
Sbjct 3257  ATCTGGCAGCAACAGTCACAGCTCAGCGCCCAGCTCACAGA  3297

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