Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13512
Subject:
XM_011524629.3
Aligned Length:
3213
Identities:
1445
Gaps:
1764

Alignment

Query    1  ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC  74

Query   75  ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA  148

Query  149  AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG  222

Query  223  CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA  296

Query  297  AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC  370

Query  371  TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT  444

Query  445  CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC  518

Query  519  CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT  592

Query  593  CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG  666

Query  667  TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG  740

Query  741  ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT  814

Query  815  CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC  888

Query  889  CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT  962

Query  963  GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC  1036

Query 1037  TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT  1110

Query 1111  CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA  1184

Query 1185  ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA  1258

Query 1259  GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT  1332

Query 1333  ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT  1406

Query 1407  TTACAAACAGATACGTGCTAATAAGGTT---TCTGT----------GTGGAGA--CAG----------------  1449
            |||||||||||||||||||||||||.||   |||||          .||||.|  ||.                
Sbjct 1407  TTACAAACAGATACGTGCTAATAAGATTGAGTCTGTTTCTCAGCCATTGGAAAACCATGGTGCCCCTATTATTG  1480

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1481  GTCATATTTCAGAGTCACTGTCTACCAAATCATGTGGAGCACTCAGACCTGTCAATGGAGTTATTAACACTCTT  1554

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1555  CAGCCTGTCTTGGCAGACCACATTCCAGGTGACAGCTCTGATGCTGAGGAACAATTACATAAGAAGCAACGACT  1628

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1629  GAATCTCGTCTCTTCATCATCTGATGGCACCTGTGTGGCAGCCCGGACACGTCCTGTACTGAGCTGTAAGAAGC  1702

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1703  GGAGGCTTGTTCGACCCAACAGCATCGTTCCTCTTTCCAAGAAGGTTCACCGGAACAGCACAATCCGCCCTGGC  1776

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1777  TGTGATGTGAATCCCTCCTGCGCACTGTGTGGTTCAGGCAGCATCAACACCATGCCTCCCGAAATTCACTATGA  1850

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1851  AGCCCCTCTGTTGGAACGTCTTTCCCAGTTGGACTCTTGTGTTCATCCTGTTCTAGCATTTCCAGATGATGTTC  1924

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1925  CCACAAGCCTGCATTTCCAGAGCATGCTGAAATCTCAGTGGCAGAACAAGCCTTTTGACAAAATCAAACCTCCC  1998

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 1999  AAAAAGTTATCGCTTAAGCACAGAGCACCCATGCCGGGCAGTCTGCCAGATTCAGCTCGTAAGGACAGGCACAA  2072

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2073  ATTGGTCAGCTCCTTCCTAACAACAGCCAAGCTGTCCCATCACCAAACCCGGCCTGACAGGACCCACAGGCAGC  2146

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2147  ACTTAGACGATGTGGGGGCCGTGCCCATGGTGGAGCGAGTGACAGCGCCAAAAGCAGAGCGCTTGCTCAACCCA  2220

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2221  CCACCACCCGTGCATGACCCAAACCACAGCAAAATGAGATTGCGAGACCATTCATCTGAGAGAAGTGAAGTGTT  2294

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2295  GAAGCATCACACAGACATGAGCAGTTCGAGCTACTTGGCAGCCACCCACCATCCTCCACACAGTCCCTTGGTGC  2368

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2369  GACAGCTCTCCACCTCCTCAGATTCCCCTGCACCCGCCAGCTCTAGCTCACAGGTTACAGCCAGCACATCGCAG  2442

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2443  CAGCCAGTAAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACAACATTGTCATCCCAATGTCTGTTGCTGC  2516

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2517  AACAACTCGCGTAGAGAAACTGCAATACAAGGAAATCCTTACGCCCAGCTGGCGGGAGGTTGATCTTCAGTCTC  2590

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2591  TGAAGGGGAGTCCTGATGAGGAGAATGAAGAGATTGAGGACCTATCCGACGCAGCCTTCGCCGCCCTGCATGCC  2664

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2665  AAATGTGAGGAGATGGAGAGGGCACGGTGGCTGTGGACCACGAGTGTGCCACCCCAGCGGCGGGGCAGCAGGTC  2738

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2739  CTACAGGTCATCAGACGGCCGGACAACCCCCCAGCTGGGCAGTGCCAACCCCTCCACCCCCCAGCCTGCCTCCC  2812

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2813  CTGATGTCAGCAGTAGCCACTCTTTGTCAGAATACTCCCATGGTCAGTCCCCTAGGAGCCCCATTAGCCCGGAA  2886

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2887  CTGCACTCAGCACCCCTCACCCCTGTGGCTCGGGACACTCCGCGACACTTAGCCAGTGAGGATACCCGTTGTTC  2960

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 2961  CACACCAGAGCTGGGGCTGGATGAACAGTCTGTCCAGCCCTGGGAGCGGCGGACCTTCCCCCTGGCGCACAGTC  3034

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 3035  CCCAGGCGGAGTGTGAGGACCAGCTGGATGCACAGGAGCGAGCAGCCCGCTGCACTCGACGCACCTCAGGCAGC  3108

Query 1450  --------------------------------------------------------------------------  1449
                                                                                      
Sbjct 3109  AAGACTGGCCGGGAGACAGAGGCAGCGCCCACCTCGCCTCCCATTGTCCCCCTCAAGAGTCGGCATCTGGTGGC  3182

Query 1450  -------------------------------  1449
                                           
Sbjct 3183  AGCAGCCACAGCTCAGCGCCCGACTCACAGA  3213

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