Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13536
- Subject:
- NR_027436.2
- Aligned Length:
- 3662
- Identities:
- 236
- Gaps:
- 3413
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCAGCGTTTGGGTGAAGACGGAGGCGGGTTCTGGACAGACGTACGCTGTCAGGGAGTGTTTACTTTGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTCTGTTCCTCCCCGCCCTGGTGCTGCTCCGGGTCACATACTCGTCCTGAGCCGGCTTCAGCCTCTCCGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTGTCCCGGAGCCATGGCCGAGTACTCTTATGCGAAGTCTACCAAGCTTGTGCTCAAGGGAACCAAGACG 222
Query 1 -------------------------------------------------ATGCACTCCA-CCCCCGCGAATCCG 24
|.|||||||| |||||.||||||||
Sbjct 223 AAGAGGTGGGTCCTGCACCTCCGGCGGGAGCCTCCTCAGTTCTTTTCGGACGCACTCCACCCCCCTCGAATCCG 296
Query 25 GTGGAAGCCGTGGTGCAGAGAGCCGGCTTTGTGGCCTCCCAGGCTTCGCTC----------------------- 75
|||||||||||||.||.||||||||||||||||||||||||||||||||.|
Sbjct 297 GTGGAAGCCGTGGCGCGGAGAGCCGGCTTTGTGGCCTCCCAGGCTTCGCCCTGGCCCCTGTCCGGGCTGGACGG 370
Query 76 -------------------------------------------------------CGACCCTGGAAACAGGATA 94
|||||||||||||||||||
Sbjct 371 AGGCCGGACCGCAGTTCCTGGCGCCTGTGCAGAGAGGGGCAGCCTCCCGCACTGACGACCCTGGAAACAGGATA 444
Query 95 GACGGGCGGGTGACCCGTGGCCCCGTACCCACGAGTTTGGGTACCCTGAGGCATCTCTCCAGGCCTCTGCCTGT 168
||||||||||||||||||||||||||||||||||||||..||.|.|||||||||||||.|||||||||||||||
Sbjct 445 GACGGGCGGGTGACCCGTGGCCCCGTACCCACGAGTTTCAGTCCTCTGAGGCATCTCTGCAGGCCTCTGCCTGT 518
Query 169 AAGAAGAAAAAGAGCAAAGATAAGAAGAGAAAAAG---AGAAGATGAAGAAACCCAGCTTGATACGTTGGAATC 239
||||||||||||||||||||.|||||||||||||| |||||||||||||||||||.||||||.|||||||||
Sbjct 519 AAGAAGAAAAAGAGCAAAGAGAAGAAGAGAAAAAGAGAAGAAGATGAAGAAACCCAGTTTGATATGTTGGAATC 592
Query 240 TGGTGAACAG---------------------------------------------------------------- 249
||||||||||
Sbjct 593 TGGTGAACAGTAACAAACTTTGATGAAATTTCAGGAACCATAGCCATTGAAATGGATGAGGGAACCTATATACA 666
Query 250 -------------------------------------------------------------------------- 249
Sbjct 667 TCCACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAGAAGGGGAAAATGGCTTTGTTGGCCTCAAAT 740
Query 250 -------------------------------------------------------------------------- 249
Sbjct 741 GGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGAT 814
Query 250 -------------------------------------------------------------------------- 249
Sbjct 815 CAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTAA 888
Query 250 -------------------------------------------------------------------------- 249
Sbjct 889 AACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGTAAAGAAGAC 962
Query 250 -------------------------------------------------------------------------- 249
Sbjct 963 AGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCAAGAGACGCTTCTGGACAGAGTCGCAGTCATAGC 1036
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1037 CTGCCTTCATCTCTGAAGGGACCAGGTAACACACGGAGTGCCTTGGCAGCCTCGTCATTGCATGCAATCTTCAC 1110
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1111 AGACAATATCTCACTGCAGCCACCTTTCTACAGGAGTACAGGTGTGACATTATACTGATGACATCATTCTCAGA 1184
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1185 GAAAATTCATTTTACACACTGAAGATACACAGACACAAAGAGCCTTATACAAAGGGAATGGACCTTTCCCCAAC 1258
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1259 ACAGTAGTGCAAGGCCCTGCCACTTTGCTTCAATTCCTGAAAATTCCTTGGTAAACTTGGGGCTGCTCTATTCC 1332
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1333 TGACAGTTTCAAGAAATAGTTATTCATCCTCTCAGCATCCACAACGTTAATACAAGCCCAACATTCTTTAATTT 1406
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1407 GTGTTTTGTTTTTTGGAGACATAGTCTTGCTCTGTCACACAGGCTGGTATGAAGTGGCATGATCTCAGCTCACT 1480
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1481 GCAGCCTTGACCTCCCAACCTCAAGCAATTCTCCCATTTCAGCTTTCCAAGTAGCTAGGACTACAGGTGTGTGC 1554
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1555 CATGACACTCAGCTAATTTTGTTTATTTTTTTGTAGAGAAAAGCTCTCGCTATGTTACCCGGGCTGGTCTCGAA 1628
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1629 CTCCTGGGCTCAAGAGATCCTCTGGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGTGTGAGTCCATGTGCCCA 1702
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1703 GCCCTTTAATTCTTTACTTGGGGTTCAGGTGACTACACATTTCTTACTTACAAATTTTACTTAATCTCGCTGAT 1776
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1777 GCTGTCACTTGAAAGCTGACCCACCTTGAATGAAGCCTCCTCCAACAAGTCTGGAATCCATCCGAATTTAAATT 1850
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1851 AACAGGCGCTCCTATGAATTCCATCAGAGAACACACTGTAGATGCTTTAGCAACCTCTTCCCATGCCTCCGAAG 1924
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1925 TATCTGGTTTGCATGTGGTGGCCATTAGTCATCCATGGGCTTCTGATGTAAAAAACAAACCTGCCTCTTTTGAC 1998
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1999 CCTGTGCTGTACAGCATCAGGGCAGTGATTGCTGGCCACATACTGGACCCTTGAAACAGAGGGCTCTGCATCCA 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 TGTCCATGAGCCTTCATGCCCATCTGGCCATCAGGCCTTGGGAAGCAGCACCCCACAGCTTTGGCACAGCTGCA 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 GTGACCTCCTTGCCTCCGAATGGAGTCAAATCTTTACACGATGCAATTCTCATCTGCAGGAAGCACTGGCCTCC 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 TTCATCCTTAGGCTACAGTGCTGACACTGGCCTCCTTCATCCTCAGACTGTGGTGCCAGATGTCACCCCTCTGC 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 GAGGCCCTTGGGATCGACTGAGTGACCAGCAGTGAAGTTTGTCAGCCTTCTGAATGGATGCCATGATCAGATGT 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 GATGGAGCTCAGTGGGATTCTGCTGCTTTCCCTCCCTTAGCTAGGATGTCCCTGATAAAGGATGACACACAAGC 2442
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2443 CTCAGCACAACTGGCCAAACTTGAGGTGGTCATCATAGCACTGATGCTGGGCCAACAATTAACCCCACTTGTAC 2516
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2517 CTTTTTACAAACTTTTTGACAATTGCCAAGAATTGTCCAGCTTCCCTCCCCATTGAATTAAATACACTTCTTGT 2590
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2591 CTCATGGATACTCAGAATACCAATCAAGGTAACAGATGCCTTTATTTTAACTAAGGACACGGTACAGATCTCAC 2664
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2665 AGGGACACTCCTTATCCCTTGCAGAGTTCCAGACACTACTGATGGTCACCAAAGCAACATTTCATCAGAAAACA 2738
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2739 CAGTGCTGGGCTTGTGAAGAAGGTGTCCAGCAGAGCTTCCACTGCTCCTGTAGGCTGCAGGAAGCTGCTTCAGT 2812
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2813 TGAGAGATACACTGAGCTCCTCAAAGAATTCCTATTTAAGGTACAAAGCAGCGAGTGGATGCCCTGCTGGATTC 2886
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2887 CACTATTGCCACAGGCTTTGATAACTCTAAGTTCATGCTCCTTAGGAAAGTGCACTTTTTACACCAATGCTAGA 2960
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2961 CAGTTCCCTCAGTTGCCTTTACTGGACATCAAGGAGTTCACATTTTTGACAATCTTTCAGTCCTGAACTGTCCA 3034
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3035 AGGGGTGGAGGTAGCTCCATACAGGAAGCTGCCTGCTGCGTGTGGATCAGTAATATCAGACTTGCCCAACAGCT 3108
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3109 CACTGGAGACATGAAAACCCATGCATGGGGGATGCATGACGTCACCCAAATATTTACCACACGCTTGTGCTGCC 3182
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3183 AGAGACCCCAGATCACTTTTCCTGCCTCCTGCTAAACAAATGGGAGCAGTAGCTTCTCATCAGCCTCCACATTT 3256
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3257 CATTACTCATAATTGTGGCCTTCCTAATGTCTCATGCCCCTAAGCATTTATTACAATGTCTCAACAGCCTTCTC 3330
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3331 TCAGCCTCTCAAAATATTAGTCATCATTAAAATAAATGTCTGATGTTAAAGCATCAGGGTCAATTGTACTGTGA 3404
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3405 CACCTAAAATTTCATGCTGCATCCCACCAGGTCCTCAGCCTAATGGCTTTCATGCCCCCAACAGACTGCTAAAC 3478
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3479 TCTTTGAATTAGTCAAGCACATCCCTCAAGGGACAAGGGGTTACCCCACCCTCTGATTTCTACCAAGCCTGCCT 3552
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3553 CCCGCACCCTGTGCTCCAGAGTGAACCCCCGGGTAGACCTGCACAGATGCAGTGTCATCCCCTGTTGGGCTGAG 3626
Query 250 ------------------------------------ 249
Sbjct 3627 TATGCGCGATGAATAAGTTACGGTGAATTTCGTCTA 3662
