Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13577
Subject:
XM_006519492.2
Aligned Length:
1035
Identities:
553
Gaps:
390

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTCACCAGCACCGGCTCCAGTGGGCTTTATAAGGCACCTCTGTCGAAGAGTCTTCTGCTGGTCCCCAGTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGTCCCTCCTGCTGACTCTCCTGCTGCCTCACTGTCAGAAGTTCTTCGTGTATGACCTCCATGCTGTCAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGACTTGCAGATTTGGAGGCTGATATGCGGAAGAATAATTTGCCTTGACTTGAAAGACGCTTTCTGTAGTGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTTCTCATTTATAACTTCAGAATATTTGAAAGAAGATATGGAAGCAGGAAGTTCGCATCCTTCTTGCTGGGTTC  296

Query    1  -------------------------------------------ATGCAGTATTTCTTTGGCATCACTGCAGCTA  31
                                                       .|||||||||...||||..||||.|..||.|
Sbjct  297  CTGGGTCTTGTCAGCCTTGTTTGATTTTATCCTCGTGGAAGCCGTGCAGTATTCGCTTGGTGTCACAGTGGCCA  370

Query   32  GTAATTTGCCTTCTGGATTCCTGGCACCTGTGTTTGCTCTGTTTGTACCATTTTACTGCTCCATACCAAGAGTC  105
            |.||.||.||||||||||||.||||.||.|||||.|||||.|||||.||||||.||||||||||.|||||||||
Sbjct  371  GCAACTTACCTTCTGGATTCTTGGCGCCCGTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAGAGTC  444

Query  106  CAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTATATATTGGGACTGCAGCTTTT  179
            ||.|||||.||.||.|||||.||||||||||||||||||||||||||||||||||||||||||||.|||     
Sbjct  445  CAGGTGGCGCAGATCCTGGGCCCGTTGTCCATCACAAACAAGACATTGATTTATATATTGGGACTACAG-----  513

Query  180  CACCTCTGGTTCCTACATCTGGATTGTAGCCATAAGTGGACTTATGTCCGGTCTGTGCTACGACAGCAAAATGT  253
             |.||||||      ||                                    |||||||.|||.|||||.||.
Sbjct  514  -ATCTCTGG------CA------------------------------------TGTGCTATGACCGCAAAGTGC  544

Query  254  TCCAGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGACACTTGAACCCATCTTC  327
            |||||||.||.|||||||||.|||||||..||.|.|||||..|.|||||.||.|||.|.|||||.|||||||||
Sbjct  545  TCCAGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGGCCGAGTTCTTCTCCTGGGCCCTTGAGCCCATCTTC  618

Query  328  TCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAGAGAAT  401
            ||.||||||||||||||||||||.|||||..||||||||||||||||..||||||||||||||||||||||.||
Sbjct  619  TCATCTTCAGAACCCACCAGCGAGGCCAGGGTTGGGATGGGAGCCACCGTGGACATCCAGAGACAGCAGAGGAT  692

Query  402  GGAGCTGCTGGACCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAGACAGCAGCAGGGAGGAA  475
            |||||.|||||||||||||||||||.||||||||||||||||||.||||||.||.||.||||||||||||||||
Sbjct  693  GGAGCAGCTGGACCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAA  766

Query  476  TGATCAATTGGAATCGTCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAACTATCAGGGCGGTCGGCAGTCT  549
            |||||||||||||.||.|||||.||.||||||||||||||||.|||..|.||||||||.|..||.|..|.||||
Sbjct  767  TGATCAATTGGAACCGGCTTTTCCCCCCTTTACGTCAGCGACGAAATATCAACTATCAAGATGGACCTCGGTCT  840

Query  550  G---AGCCAGCAGCGCCCCCTCTAGAAGTTTCTGAGGAACAGGTCGCCCGGCTCATGGAGATGGGATTTTCCAG  620
            |   |||.||||.|.||.||.||.|||||||||||.||.|||||.|||||.|||||||||||||||||||||||
Sbjct  841  GAGCAGCGAGCATCTCCTCCCCTGGAAGTTTCTGAAGAGCAGGTTGCCCGCCTCATGGAGATGGGATTTTCCAG  914

Query  621  AGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCAC  693
            |||.||.||.|||||.||||||||.||.||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  915  AGGGGACGCCTTGGAGGCCCTGAGGGCCTCAAACAATGACCTCAATGTGGCCACCAACTTCCTGCTGCAGCAC  987