Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13623
- Subject:
- XR_001744713.1
- Aligned Length:
- 3208
- Identities:
- 487
- Gaps:
- 2719
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGAGAAGAG 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 AACAGAAGAATAACAGCAGAAGATACGCAGCCTGTAATGGACTGAATATCTGTGTCCCCCTAAACCCACATATT 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 GAAATCCTTCCCCCAGTGTGATGCTGTTTGGAAGTGGGGCCTTTGGGAGGTGATTGGGTCATAGGGGTGCAGCC 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 CTCATGGATGGATGAATGCCCTTCTAAGCCCAGGCCAGAGGGCTAGCTTGCTGTTTCTCCTCCAGGTGAGGATA 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 CAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCCAG 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 AACTGGCCTTGGTGTACCTTGTTGTAGTGTTTGAAAACATCTGAGGCTGCATCCATCTCCAGCACCCCATAAAG 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 CAACAGCTTGCAGAACCCGGCTAGGAGGCGGCGCCGCTGGTGTAGCCGCTCTATCTGTAAATGATCCTCCTGGG 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 AATCACCTGGCTCACATGGAAGGCAAAAGGGAATCACAGACTTAAGCTTCCTGCCCTATATTTCTGAGCTACAC 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 CCAAGCCCCAGCCCTTACTGAGCCCCAGGTATAGAGTCACTGCACCACTGCCCAGGTCTCCCGGCTGGATGAAG 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 ACGTGGTCCATGAGGAAGCTGGCTAGCTCAGACTGGAGAGTAGCTTCAGGAAAAAAGACAAGTGGCCTAAGGAA 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 ATCACGGCCCCCAACAATCATCTGAGGGCTAAAGATGAGAAGTAGATCACTTAATAAGACAAAAGCCTGTAGGG 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 GGAAAAGAAAGGATGTTTAAAAGGACAGAATGTTTCCCAAGGTAGAAATGACACTGTCAATTTCTCCTTGGAAT 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 GGGGGCAGGGATACTCGCCTTGTTGCTCCCACTTGAGTCAGTACTCACCTGCTCCTGGATCTCAGTATCCACAT 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 CTGAGAGGCAACTCTGGCAGAGTTCACAGAAGGCCACCATTCTGTCCCTCAAACTCGACAGCTGCTTCTGTGGG 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 CACAGTGGCTTGAAGGGGAAGAATGAAGACACAGACTCCTCTGTTCCCATTATCCCATCTAAGACCCACACTCA 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 CCTGGGAAGCATCTGATTTAGAAATGTGGGTTAGTGTCCAGAGAATGGAAAAATAGACAAGAGTCAAGGCTGGC 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 AGGATAACCTGTAACAACAAAGGGTTTGAAAAATGAGGTTTGGGTTAGGAGAGGGAGAGACAGATAGCCAGAAA 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 CACACCAGTGAAGAGGAGAGAAAATGAGTAAAGGGAGAGCTAATTCCTTTTCCAGTGGAAAATGAGTGATATTC 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 TGGACATTCTTCAGAGGCATCTACACGAAGTAGAAATGTCACCGCTCCCTAATTTACTCTACGTCTTCTAGAAT 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 CCCTCAATATTATCCTTGGCTTCCAGGAAATCCAAGAAGACCCTGGAAGTAGAGTCCACCTTCTAAGAGAGGAA 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 TGTAAGAGGTGACCCCCACCCACCTGATCTTCCTCGCTTTGTCCACTCCACGCACTGAGACTTGACACACCTAG 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 TGGCCACCTAGAACGTAGGTCCTTAAAATCTAGCCCCCCAGCCCCCAACCCATCTCTAGCCTGTCCACTCACCT 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 GGTGAGGAACCTCTCCTGTGTCCACAGCCTTCTGCAGGAGTTGGCAACATGGCTCATAGAGCTCCCAGCGAGTC 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 AGGTCATGAGTGCTTTGGGGGAGAAAGGGGAATGTTATACTGGAAAAGAACAGAGGGAACCAACTCCACAGACA 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 CCAGTAAAAACGGGATGGGGAAGAGGAGGAAAGCCACTCACTTGTAGAAGGCAGAGAGGCGTTTCAGAGTGGCT 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 GCCAGATTATATACCTCATCCTCATCTAGGAAGGACGACTGAGAAGGAAAGAAGATCCACAATAGCATTTCCCC 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 CAGAACTCATCAGTCCACATCCCCCGTCTTGCAGCCCCTCCCACCCTTGTTTGGGGTGTCCCATTGTCCAGCCC 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 CAGCTCCTACCTGTAACAGCTCTTCAAGCTCCTGCTGGAAGCGGTCAGTCAGCAAATCTACTAGCTGGCTGCGG 2960
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2961 GCAAAGTCCGCCCGGCTGAAGAAAGTGAATTCGGGATTACAGAGCAGGTAGAGGGCATGCGCCCCAGCCTCAAG 3034
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3035 CACCGCTGGCTCTGCATGCTTCACCACCACCTCCTGGAGTTGCTGCAGGAACAGCTCCAGGTGCTGAGAAGAAA 3108
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3109 AGGCAGAAGATGGTGTGCTGTGGGGATGGGAGGAGGACACTCTTCTGGCGGGAAGTGGAACGGGGTTAAAAGCA 3182
Query 490 -------------------------- 489
Sbjct 3183 TTAAACTTCAAGGATAAGATGCCTAA 3208
