Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13623
- Subject:
- XR_002956434.1
- Aligned Length:
- 5377
- Identities:
- 487
- Gaps:
- 4888
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGAGAAGAG 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 AACAGAAGAATAACAGCAGAAGATACGCAGCCTGTAATGGACTGAATATCTGTGTCCCCCTAAACCCACATATT 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 GAAATCCTTCCCCCAGTGTGATGCTGTTTGGAAGTGGGGCCTTTGGGAGGTGATTGGGTCATAGGGGTGCAGCC 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 CTCATGGATGGATGAATGCCCTTCTAAGCCCAGGCCAGAGGGCTAGCTTGCTGTTTCTCCTCCAGGTGAGGATA 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 CAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCCAG 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 AACTGTGAGAAATACATACCTGCTGTTTGTAAGACACCAGTCTATGGAATTCTGTTACAGTAGCCTGAACTCAG 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 ACATAGCCCTTTTCCATTTATAAGGTGGTTTTACCTTATATTTTATGTAAAAGGTCCATTTTATTTATTTTTGA 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 ATTGTTGATTTTTTTTTAAGAGACACGTGTTTACTATGTTACCCAGGCTGGACTCCAACTCCTGGACTATTGAT 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 CCTCCTGTCTCCACCTCCCGAGTTGCTGGAACTACAGGCTAACAGCTCTGTTTTAAAGATGAGAAAATGGGCCC 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 CACGCAGTGGCTCACACCTGTAATCCCAGCACTTAGGGAGGCTGAGCCAGGTGGAGCCACTTGAGGTCAGGTGT 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 TCGAGATTAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGATG 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 GCGCGTGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCAGAGGTTGC 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 AGTGAGCCGAGACTATGCCACTGCACTCCAGCCTAGGTGACAAAGAGAGACTCTACCTCAAAAAATAAAAATAA 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 TTAAAAAATAAAGATGAGAAAATGGAGGCTGAGGAGGGGTAAAAGCGCTAACTTGACATGGAGTTGAGGACTAG 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 CACTCATGTCACCTCACTCCAAATGCCAGGCTTTTCCCACTACACCAGCAGCAGTTCCTCCTGGGGAAACAGGC 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 TAGGTTAGAAAGGGAGTGAGGGAAGGGACAGGGAGGGGAAGCCCTCTAGTAGGGAGATGGAGGATAGGGGGTCA 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 TGTTTTGTGGGGAGAGACACTGAAGGGGCTGCCACTTGGACTGAATGACCTCCCACCTCCAGCATTAGGACTCC 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 TTCCAATTCCTAGGGGGTTCGGAGGCAACAATATTTATTTAGGGATTGGGAGCGAGAGTGCTATTCCAACCTTC 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 TTTGGTATTTGTAATTTCTTTTCCTTATTCTTTAATAAAAGTAGAGTCCAAGCAAAGTCCAAACCAACATATAA 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 CCTGTCCTCCTTTACTCTAGATTCATTCAGCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAGGGGAAACACC 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 CTGGCTTCTCTTTGGCACATCAGCCCCTAGTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCACCATGTCTGTA 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 TCCTGCCGTTCTTCATTTGACTCATCCTGGATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAAGGCTGAGTCT 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 GATGTAGGGGCAAAGAGACTGGCTTTTCAAACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGACACCCGGGGT 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 GGGGGAAGTGGGGAGCAGTAAGTACAGCATAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTCTGTGGCTAAA 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 ACAAGTCCAAAAAGCACCCACAGAGAGGCAATGGGTGAGACAGGAATCCCCTCACAGTGGGCGACAGATCTGAA 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 GTGAAGACAGGAGATGATGAGAAAAGCTCACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAAGGGTTGTGTG 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 GAGTCTGGAAATATTGTGGACCCAAGAACCTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCTGGGAATGAAG 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 CAGGATCAATGATGGGATAAAAATCAAGGGTAAGAAGAGGATGTAAGGCAGCTGGTGTTAATGGGGAGAAAAGC 2960
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2961 TCAGAGAGATGCATTTTAAAGCTAAACAATGGAGAAGGGTTTGAGAAGAACCCAACAATGTGGGAGTGCTACAG 3034
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3035 CAGGGAACCATGAAACAGAAACAGCAAGATGGAGGCAGCCAGACACCAAACTGGGAACTCAGACACCCAGATTC 3108
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3109 CCTCCATGGCCTCACCCCTGGGCAAAATCCAACTCTGAGCCATCTTCTTCCTCCATCTCTTTCAACCCCCACAG 3182
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3183 GGGCTGCCTGCTCTTCACAGCTGTGGAGGTGAGGGTGGGCGTGGGCGGGATGCTGTTCAGCTGCAGACTTTCTT 3256
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3257 CCTGGGACGAGGAGACGTCCTCTCTGTTAGGCTTGGCAGGCCCTGCCAAGCAGATGCATACATTAACCACAGCC 3330
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3331 CAGGGCCTGCGACAGGTGTGCTCTCTTTCCAAGACCTGCCCAGGATTTAGTAAGGGAAAGTCAATCAGGAAGAG 3404
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3405 AATGGAAAACTTATACAGCTTCATTCTGTTGCCCTCAAATGGGCATAGCCCTATGTACTAAATACATAGCCCTA 3478
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3479 TGTACCAAAAAGTAAGGCTTAGAGAATTGTAGCTAGGCCTTGTCCAAGAAGAACTTGCTACACAGCCTAGAAAA 3552
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3553 CAAGATGGAAAGATATATAAATATACATTTCACAGATAAACTGTAACAGGTGAACAGGTGAACACAAACATGAG 3626
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3627 GGAGGGTTGGAGTCTCTAAGATTGAGAGGTCTGAGTTAGCCAATGAAGACATCTGAGATCCTATCCAAGATTTC 3700
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3701 TGTGGTCAGAAAAAGCTGTAAATGGCAATAGAGTTTTGGTACCAGAGGCTAGAGTGGACAAATGAGGGCCAGGG 3774
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3775 AGGAACCGGAAAATGGGAGACAGGATTTTCTAAAAGCTAGAAAAAAATGAAGTGATTGCAATGCCAGTATAACT 3848
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3849 GATATGATATGAAGGGGGACTTATCTCCTGCAGAGATTGGAGAAGGTAGAGGAGGAGAAAGAATCCAAAGATTC 3922
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3923 TCACTGCCTGAGAAAACCCAGGCAATACTATTTTAAAGCATCAGTCAAATTGACATTAACATCTGTTAACTGTA 3996
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3997 AACAGTCACACTCCCATTACCCCCCTTCTCCACTAAAAACAATAATCCCAAAGTGAGCGCTCAGCCTATGGGTT 4070
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4071 TAAGCAGAGGGCTACAGAAAACAGGGAAGAGACATACCCCTGGGCTTGGATTCCCAGAGAGGAAACCTTGGGGC 4144
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4145 CCCAGATGTGTCCTCCTGATCTCCCTGAGCTATTAATGGTGTGATGCCCGAGGGCTGGGCCCTTGAGTCTCTCC 4218
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4219 TCTTCTCCATCTTCACTGGCTTCCCCAGCCACTCACGTTCATGTCCTTAAATATCACCTATACTCTGCCACATC 4292
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4293 CCAAAGGGATCTCAAGCCTTCAGCTCTCCCCTGAACTCCATCTTAACAGCCCCCATGGTTTGTTCAACATCTCC 4366
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4367 ACCTGTAATCCTGTGGCCAACACCAATGCCCCAACCTTCCCCCACAGCTATCTTCACTCTCTGCCTTCCCCATC 4440
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4441 TCAGATACTGTCAACTCCATCCTTCTGTCAGGCCAAAATCCTTGGAGCCATCCTCAACTGCTCTTTTTGTCTTA 4514
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4515 CATCCCACATCCAGTTTGTCAGAAAAGCCTATTAGAGATACCTTGAAAATGCACCCAGAATCTGGCCGTTTCTC 4588
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4589 GGCACCTCCACCATTGCCCCCGGCCTAAGAAGCTCTCTTATCTTGCATCTTGGGCTGGACTCCTACAACAGCCA 4662
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4663 CAACCTCCCTGCTGGTCTCCCAGCTTCTAGCCTTCCCCCATCTCCTGTCGTTTTCGACACAGCAGCCAGAAGGA 4736
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4737 TCCTTTAAAAACAGAGGTTGATCCTGTCGTTCCTCAAAATCCTCCAATGGTTTTCCTACTGCACTCAGAGTAAA 4810
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4811 AGCCAGTCTCTGCCTTAGATGCTCTGGGATCCTGTACCCTCTTTGGTCTCATGTCCTACAATCTGCATTCTGGC 4884
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4885 CATAATGGTCTTCTCTGCTGTTCCTTGAACATTCCAGGAACATTCCCCCCATCCCCTCGTGGCCTCAGGACTGG 4958
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4959 CTGCTTCCTTTGGTATGCTATTCTGATACACACTAAGCACCCTCCCTCACCTGTTATAAAAAATTCGCTGGGAG 5032
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5033 GCCAATAGGCTGAAATGGCTCCTGCACTTTGGGTTCCTAAGTCAGCAAACTGAAACTCAACTCAGAGTGAAAGT 5106
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5107 GTTGTGTGTAACCTAGGAGCAGGAAACTTCAGCTTAACCAGTCAGAAACTACCGACTAACCTCTAACAAGAGAT 5180
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5181 TTATGGTCAGTTAACCTCTAAATATGAACTTTCCACTCTAACCAATCAAATAGTTTCTTTGTCTTGCTCCCAGA 5254
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5255 GACACCTTGTAAGTGTCCCCTCTGGTTTCCTCGGTGGTGGCGCCCTGAACTGCTGGCGGTCTGCCACTGCCTGA 5328
Query 490 ------------------------------------------------- 489
Sbjct 5329 TTGATAAAATTGCTGAATGCTCAAATAAACCTGTTAAAATTGTAATGTG 5377
