Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13681
- Subject:
- NM_001291459.2
- Aligned Length:
- 1671
- Identities:
- 1044
- Gaps:
- 567
Alignment
Query 1 ATGGACGTGGTAGAGGTCGCGGGTAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
Query 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
Query 149 GGATTGTACATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGATTGTACATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGA 222
Query 223 AAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTA 296
Query 297 CAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACATTGAGGAAATGAAGTTGAAAA 370
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 297 CAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACACTGAGGAAATGAAGTTGAAAA 370
Query 371 ACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGAC 444
Query 445 ATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACAT 518
.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACAT 518
Query 519 CCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCC 592
Query 593 TCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAG 666
Query 667 GGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCACA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCACA 740
Query 741 ATCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATGTGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGA 814
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATGTGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGA 814
Query 815 TATTGATTGACGGG-----------------------------------GTA------AGGAGGC--------- 838
|||||||||||||| ||| ||.||||
Sbjct 815 TATTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCCTGTGGGACGTGTATCTGGTAGAAGGCGAACAGGCG 888
Query 839 ---------ATAGGGAGA---CCCT----GGCTCAG-----GGACCT----------TCC-----TTGCCC--- 873
|||...||| .||| ||.|||| |..||| ||| |.||||
Sbjct 889 TTGATGCCGATAACAAGAATCGCCTTTAAGGTTCAGCAGAAGCGCCTCACGAAGACGTCCAGGTGTGGCCCGTG 962
Query 874 ----------TGCA----GTGCCCTGCTTCCCCAGCCCGGGGGTCTGGCTCACTCCCAGCCCACAGGAGGCTCA 933
|||| ||.|..||.|.||...|||.||| .|| ||..|||.| .|||||
Sbjct 963 GGCACGTTTTTGCAACCGGTTCGTTGATACCTGGGCCAGGG---ATG----------AGGACACTG--TGCTCA 1021
Query 934 GGC------GGGTCCCCAA--AGGACAC--ACAAGCAA--------------AACCCTCTGCCCAA---GAG-- 978
.|| ||| ||.|.| |.||.|| |||||.|| |||||.|.|||.|| |||
Sbjct 1022 AGCATCTTAGGG-CCTCTATGAAGAAACTAACAAGAAAGCAGGGGGACCTGCAACCCCCAGCCAAACCCGAGCA 1094
Query 979 -GGGTCATC-----CCAGG----------------------------------GCAATGG---CTGG--GGC-- 1005
|||||.|| ||||| ||||.|| |.|| |||
Sbjct 1095 AGGGTCGTCGGCATCCAGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCAAGGGGGACAGGCAGGCCC 1168
Query 1006 --TCAGGCCCA-----------------GCCTCA--TGGGCAGACT----------GGG------------CCA 1036
.|||||||| ||| || |||.||| || ||| |||
Sbjct 1169 CTCCAGGCCCACCAGCCCGGTTCCCGCGGCC-CATTTGGTCAG-CTTCCCCGCCACGGGCACCTCGTTCTTCCA 1240
Query 1037 GGACCC-GACTTGAGAGGGC--TCAGGGAAGCCTCAAGCCC--TGGGCA--------------AGC----CCCT 1087
.|||| |.|.||...|||| ||.||||||.|.|...||| |||||| ||| ||||
Sbjct 1241 -CACCCTGTCCTGGTGGGGCTGTCCGGGAAGACACCTACCCTGTGGGCACTCAGGGTGTGCCCAGCCCGGCCCT 1313
Query 1088 CTCTCCAGGAG--CCACA----TCC--------CC---------ACTCAAATGAGTGCCC-----CCCA----- 1128
..|||..|||| ||.|| ||| || ||||.| ||||| ||||
Sbjct 1314 GGCTCAGGGAGGACCTCAGGGTTCCTGGAGATTCCTGCAGTGGAACTCCA-----TGCCCCGCCTCCCAACGGA 1382
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1383 CCTGGACGTAGAGGGCCCTTGGTTCCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTGCCATATCCCAGG 1456
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1457 AGGACCAGCTGGCCCCCTGCTGGCAGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTCGCTGCACCCAGC 1530
Query 1129 -------------------------------------------------------------------------- 1128
Sbjct 1531 ACTGATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCCGTGTGCTCCCACCTCAGGGCCTTGCCT 1604
Query 1129 ------------------------------------------- 1128
Sbjct 1605 CTGCGGCCTCCACTTGGAAAGTTCTCAGTTCCCTCCAGGCTTC 1647
