Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13704
- Subject:
- XR_001744742.1
- Aligned Length:
- 2774
- Identities:
- 238
- Gaps:
- 2534
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 ----------------------------------ATG--CAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 38
||| .||||||||||||||||||||||||||||||||||
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 39 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 113 TGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG 186
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG 740
Query 187 AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTG-------------------- 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCT 814
Query 241 -------------------------------------------------------------------------- 240
Sbjct 815 GGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAA 888
Query 241 -------------------------------------------------------------------------- 240
Sbjct 889 GAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAG 962
Query 241 -------------------------------------------------------------------------- 240
Sbjct 963 TCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCAGTTCTCAGCTCACCGAAACCTCTGCCTCCCGGGCTCAAG 1036
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1037 CAATTCTCATGTCTCAGCCTCCCAAGTAGCTGGGATTACGGGTGCACACCACCACACCTGGCTGATTTATGTAT 1110
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1111 TTTTTTCGTAGAGACAGGGTTTTGCCATGTTGGCCGGGCTGGTCTCGAACTCCTGACCTCGGGTGATCCACCCA 1184
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1185 CCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCGGCCTTGACTACCATATTTTAAATTT 1258
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1259 ACTGGAGGACTTTTTTGTTCTCTTCTTTTTTCTTTTTTTAATAGCATCCCGCTCTTATTTCAGAATAAAAAAAA 1332
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1333 TTTTAAGGTATGTTGAGTAAGAATCTATAGAGCAATGAAAATGCAAGAGCAATAGCTATGGGCACCAAATGGTC 1406
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1407 AATCTTCTTATCATAATGTTGAGTGGAAGAAGCCAGGTCCACCAGACACATGCTGCTCATTTATGCAAAGTTTG 1480
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1481 GACACAGGCAAAACAAAACTAGTTTGATCGTGATGGGAAACATTAGAGAAATGCAAAGACATGACCATCATAAT 1554
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1555 TGTCAGGAGAAGGCATTGGTTAGGATTGGGAAGCGGCAAGCAGAAGCATTTAGGGATTGGCTGGCAATGTTTTA 1628
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1629 CTTCTCGGCTGAGTGAGGGTTGCATCGGTGTTTATTTGATAACACGTTCTAGGGGCTGGGCAAGATGGCTCATG 1702
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1703 TTTGTAGTCTCAGTACTTTGGGAGGCCAAAGATGGGAGGATTGCTTGAGCCCGTGAGTTTGAGACCAGCGTGGG 1776
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1777 TGACATAGCGAGACCCTGTCTCTACAAAAAATTAAAAAAAAAAAAAAAAACCCAGCTGCGTGTGGTGGCACAGC 1850
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1851 CTCAAACTCCTGGGCTCAAGCGATCCTCCCTTCGCCTTCCAGCCACTCAGGAGGCTGGGGTGGGAGGATCGCTT 1924
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1925 GAACCCAGGAGTTTGAGGCTGCAGTGAGCTATGAATGAGCCACTGCACTCCAGCCTGGGCAACAGGGCAAGACC 1998
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1999 CTGTCTCAAAAAAAAAAAATTTAATTTGAACACTTCTGTTTTGTGCAGTTTTCTCTGTTATATTTTACTTTTTA 2072
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2073 AAAAGAAAAAGCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATC 2146
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2147 ACCTGATGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCTCGTCTCTACTAAAAACACAAAAAATT 2220
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2221 AGCCGGGCGTGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTAG 2294
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2295 GAGGCAGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACCCCAGCCTGGGCAATAAGAGTGAAACTCCATCTC 2368
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2369 AAAAAAAAAAAAAAAAAAAGGTGCATGAAACATATGAAGCAAAAAGTGAAAGTCCCCATTCTTTTCCTTTTTCC 2442
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2443 AGAGGTGATTTTTGTGGCCAATCTGGTTTCATTCCCTCCCAGACACTTTTCTAGGCATCTATGCGCCTCTATTC 2516
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2517 ACATATAAACAAAATAGGAGTTTTCCTGTGCTTCCCTTAAATGGCATATGTATCTTTCACTCTTTTTTTTCACC 2590
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2591 TAGTGGATCTTTAATACCTTAAAAGCTCAACCTGGGCTTGGTGCGGTGGCTCATACGTGTAATCCCAGGCCTTT 2664
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2665 GGGAGGCCAAGGTGGGAGGATCACTTGAGCTCAGGAGTTCCAGACCATTCCAAAGCAAAAACAAAAGGATTTTG 2738
Query 241 ------------------------------------ 240
Sbjct 2739 AGATCAGTGTGGGCAACTTAGCAAAACACCATCTCT 2774
