Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13704
- Subject:
- XR_001744749.2
- Aligned Length:
- 4180
- Identities:
- 239
- Gaps:
- 3940
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 ------------------------------------------------------------ATGCAGCACCGAGA 14
||||||||||||||
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGA 444
Query 15 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 518
Query 89 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 162
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 519 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 592
Query 163 AGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCAT 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCAT 666
Query 237 TGTG---------------------------------------------------------------------- 240
||||
Sbjct 667 TGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGT 740
Query 241 -------------------------------------------------------------------------- 240
Sbjct 741 GCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTG 814
Query 241 -------------------------------------------------------------------------- 240
Sbjct 815 CTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAG 888
Query 241 -------------------------------------------------------------------------- 240
Sbjct 889 TGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTT 962
Query 241 -------------------------------------------------------------------------- 240
Sbjct 963 TTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAAC 1036
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1037 CTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCA 1110
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1111 CACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTC 1184
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1185 TCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGC 1258
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1259 ACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCT 1332
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1333 TCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTC 1406
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1407 AGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAG 1480
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1481 GAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGG 1554
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1555 TGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTT 1628
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1629 GCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAA 1702
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1703 AACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGC 1776
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1777 AGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGG 1850
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1851 CCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGT 1924
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1925 GCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTG 1998
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1999 GGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGA 2072
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2073 GATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAAT 2146
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2147 CTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTA 2220
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2221 CAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGG 2294
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2295 AGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGC 2368
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2369 CCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGA 2442
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2443 AAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTTATTTAT 2516
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2517 TTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGG 2590
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2591 TGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTG 2664
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2665 GGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATG 2738
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2739 TTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACA 2812
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2813 GAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGA 2886
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2887 GAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAG 2960
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2961 GTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTA 3034
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3035 ACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGC 3108
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3109 GTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCG 3182
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3183 CTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGC 3256
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3257 TGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGG 3330
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3331 GCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACA 3404
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3405 GAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCT 3478
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3479 CCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGC 3552
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3553 TAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCC 3626
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3627 TGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCA 3700
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3701 ATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTA 3774
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3775 TGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAG 3848
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3849 ACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTAC 3922
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3923 TAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAG 3996
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3997 AATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGA 4070
Query 241 -------------------------------------------------------------------------- 240
Sbjct 4071 GCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTT 4144
Query 241 ------------------------------------ 240
Sbjct 4145 GAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 4180