Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_023361.2
- Aligned Length:
- 5666
- Identities:
- 243
- Gaps:
- 5388
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTCTGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCGAGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAATCTTGGACCTCATCCAGCTTAAAAAAAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACTAGCTCTTTGGGAACAAGGACCTGACATCAGAACAAGAAGGCTATAAGTTCCCAAACCTTAAAAGTTTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAACATGAATGAAATCGTGGCTCAGATTGAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTGTGTCTGCTGTGAAAAACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTGGGGAAGACTGTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCATTGAGCAGGCCCACCTGCTTCCCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCTTAGCACCACAGACTTCTGAGGTCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGCCCTTTACTTGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTAAGGGCAGAATTTTAGGAGAACCAGAGTCACCCGCTGGCTCTACTGAGATTGTTACACCCAGAATCCT 1332
Query 1 --------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGC 42
.|||||||||||||||||||||||||||||||||..|||.||
Sbjct 1333 TTTGTGTTTTTTTGTGGTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCTGTGGTGC 1406
Query 43 GATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGA 116
.|||||..|||||||||||||||||.|.||.|||||||||..|||||||||||||||||||..|||||||||||
Sbjct 1407 AATCTCGGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAGCCTCCCCAGTAGCTGGGA 1480
Query 117 TTACAGGTGCCCACCACCACAGCTG----GCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGG 186
|||||||..|||||||||| || |||||||.||||||.||||||||||||.||||||.|||||.||||
Sbjct 1481 TTACAGGCACCCACCACCA----TGCCCAGCTAATTGTTGTATGTTTAGTAGAGACAGGGTTTCACCATGTTGG 1550
Query 187 CCAGACTGGTCTCGAACTCCT-GACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGA 259
||||.||||.||||||||||| |||||||.|||.||..||.||||||||.||||||||||||||.||||.|||.
Sbjct 1551 CCAGGCTGGGCTCGAACTCCTGGACCTCAAGTGATCTACCCGCCTTGGCCTCCCAAAGTGCTGGCATTACAGGT 1624
Query 260 GTGAGCCACTGCGCCTGGCCA---------TT------------------------------------------ 282
|||||||||.|.|||.||||| ||
Sbjct 1625 GTGAGCCACCGTGCCCGGCCACCAGAATCCTTTGGTATAGCCAAGCCTTTTGGTTACCGCCTCATGAAGAATAT 1698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1699 GCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGTGCAGGACACAATCCAAATCATAAACC 1772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1773 TGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCACACACCCACACATGCCAGAGGTCCCTC 1846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1847 CTCACAGAGGAGAGGGCCTGTGTCTGTAGAAGGTTAAAGCTGACAACATGTGAAACATCCCAGAATTATGACTC 1920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1921 TTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTGTGTTGTGAATGATGAGCTGCCTC 1994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1995 CATAGGGAACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCC 2068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2069 TGGACATGACGCACGCTGGCTGCGACTAGGAGCAGGGCTGCCTCTTCTCCCTCCCCAAGGTCTGCTTGTGGGCA 2142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2143 CGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAAATGTTCTTTCTGTGGTGGAGTAGGGC 2216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2217 CTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGCTGCTTC 2290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2291 GCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTCTGGCTGGGGACCCTCAGCCTCCTGATGCTGTTGCAG 2364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2365 GGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCCC 2438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2439 TGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCATGATAAGCACAGAGATGG 2512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2513 GCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGAGGGAAGTGTAGGTGAATAGATATCAAAACCCCTGA 2586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2587 TGTCATTCTTTTGAGGGGTTGGATTTTCTTTTTTCTGGCAGACATTTCAGTACATTCACATTTCTCTCACATTT 2660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2661 GCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTATTTCGTACCTTCTGTAAGTTGGCATGAGCAAGATCA 2734
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2735 TTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGACGAAAGTAGACCCAGCTCCAGTAACCT 2808
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2809 TCCCTTAGATTACACGGGGCTGAGATCTGAGACTGTTCACTTGACTCCACTGTCCTTTTCTTTCCTCGCTGCTT 2882
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2883 AAGATGGCTTCTCCCAATGTTATCATCTTCTTTTTTATAGATAAGGAAACTGAGCCTCAGAGAGTCTGACTTCT 2956
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2957 CACAAACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAAG 3030
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3031 AGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAGGTGGTAAATGTTATGTTGAGGGTCAC 3104
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3105 AAATCCAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACTGCAGGACAGCCCTTA 3178
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3179 TGCTAGATTTCCTGGGATAGCCTAGATTTTGAATGTTTTGCCTGCCAGAAACCAATGGTTTTAAAAAATCATTG 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 AGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGCCTCTTACAATGACATAAAACTGAAGC 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 CCACTTTTTTATTTGGAAAACTCAATCCCTTTGGACAAGCCACAATAATTTTTCATTAACTACTTGAGGTTGCC 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 TGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACATCTTTTTTAAAAATAGGTTAAGGTTG 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 GCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAG 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 ATCGAGACCATCCTAGCTAACACAGTGAAAACCCATCTCTACTAAAAATACAAAAAATTGGCCAGCCGTGGTAG 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 TGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGGAGAATGGCATGAACCCGGGAGGCAGAGCTTGCA 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 GTGAGCCAAGATCGCACCACTACACTCCAGCCTGGGCAACACAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAA 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 AAAATAGGTTAAGGTTGTATAGAATACTAGGCTTTCCTTTTTTTGTGAGATGGGGGTCTCACACTGTGGCTCAG 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 GCTGGAGTGCAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGCCCCGGGGTCAAGTGATCCTCTCACCTCAG 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 CCTCCTAGGTAGCTGGAACCACAGGCACGCAACCACCACTCCTGGCTAGTTTTATTTTTTTAGTAGAATAAGGT 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 CTCACTATGTTGCACAGGCTGGTCTCTAACTCCTTACCTCAAGCCATCCTCCCGCCTTGGCCTCCCAAACATGT 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 TGGGATTACAGGTGTGAGCCACTGGACCTGGCCAAATACTGGGTTTTCAGTGCTCACTGCCACTAATAAAAATC 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 TGAAATTCTTTCATTATGCAATTTCTAAGTGCCTGGTGAGGGCCAAGCTCAGTTCTAGGCTCTGAAGATTAAGA 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 GAGAAACAAGGCTCTGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATATA 4288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4289 GTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGGA 4362
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4363 CAGTAACCCATTTCCCTACGCCCTACCTGATCACATCGTGCCCTGCTGGGCCATACCCCAAACAGCCCACCTTC 4436
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4437 CTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTCAGGATATCTTGAGCCCTCTCAAATCC 4510
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4511 CTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCACCACTTCCACTACCATGGAGCCCACT 4584
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4585 TAGTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGGGAGCAAGGCTCAAACCAGGGGCAGCTA 4658
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4659 AATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGAT 4732
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4733 GCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGTAGGGGCTAGTCCAAGTTTAGCAATAGCCAAACTGGA 4806
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4807 GAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCAGACATCCTGATTTTCACCTTCCTGAG 4880
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4881 TCTACCCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAG 4954
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4955 CACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAAGACTGTCTCCCTTCTCGGGAGCACTGG 5028
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5029 AGGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAACAGGCCCCTATAGGGAAGCAGTTCCAT 5102
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5103 GAAAATGATTAATTCTTTCCAAAAGACTTAAAATTTTTTCCTATTTCAATTTTCCTTTCAAAAAAGGAAATACA 5176
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5177 TTCATGTAGTTCAAAACTTAAGAAAACAAAAGTCTGTTCAGCAAAAGACTCCCACTCCGGTTCCCCAAACGCTG 5250
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5251 AGCCCCACCCCCCATCCCTGGTAGCAAGAAGTGTTTCCAATTTTAAGGTTAAGAAACAAAGTCCCTGGATTTGT 5324
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5325 GTTAGGGATGTCTTCCTGAGAGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT 5398
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5399 GCCGCCCTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCCT 5472
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5473 TGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGTTTCTGAAGTTACTGGCTGTTTACCCT 5546
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5547 GCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTGCTGCATCCCAGCTGCTGGGCACGGTA 5620
Query 283 ------------------------------------------ 282
Sbjct 5621 CCTGGTCCATGGCGTTCAATAAATAACTGTTGGATGAGTGAA 5662
