Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_024506.1
- Aligned Length:
- 3845
- Identities:
- 239
- Gaps:
- 3574
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCTGTAGAGCTCCGATGATGGCTGTTGGCCGAATGGATGAATGGCTTCATTAACTTCACTGCAACACGCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCTTGATCTCCCCCCTTGAAAGGCTGGAGCACAGTGGCATGATCTCGGCTAACTGCAACCTCTGCCTGCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGCAAACAATGGACTATTGACTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTTCAGAGCTGTGGGTGTTCTCAGAGGGAGGCCAGCCAGAACACCAGCATCTCCGGCTTTTCTTCCAACTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTTGGAGCTCCATCTATCAGAAATATGAAACCCTGGAATCTTCCTCCTCCTCACTTCTCTGCCTTAAGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTAGTCCACTGCCTGGAACATGGAAGATGCTCCATAATTGTTTGCTGAAGGAACGAGTGATAACCAGAGAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTCCTGCTTCCTGATTAAGGCATGCAGTCAGGCCAGTGGGGAAATGGGCCTCATGGTGGAGCTTGCCTCTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAAGACTGACGGAGCCAGGGCTCTGCCTGCCACAATTCATGAGCTGGCCAGAGGTCTTTGGATTCCTCCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCATTGCTGAGATGAGTGAGGATTGTTTCAGAAAATCAGGCCTCCTCCTGGGGAATGTGCCTCAGCTTCTGAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCATCGGAGCTCCTCTGGAACATGTCCTTGTCTTCTCAGAGTGTGAAGTGTGTGTGTGACAGTGCTTTTCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACTCAGGTGACCTGGAGGCTGGAGAACAGCATGGAGCAAGGAAAACAAAGACGATGTGCTGGAGTGTATGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTTTCATAATTATGTGAAAGAAAATGTAGAGAAATTTGAAAGGTAAGATCTGACCGCTTTGACCCCTCTCCTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACACCAGCCTATGCCCCACTTTCTTGAAGACCCACTCCCCAGCTTAGCAGCCAGGTACCCATCACAGCCTGGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAAGAAGGGAGCCCAGTCCGCCAGGTTTGTTCTCTCTCCTTCGGTCTGTCTCTGTTGGCCAGTCTGTCCAGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCACTCTGTCCATGGGTCAGTCTCTCCTTCTTTCTGACTGTCTTCCTATCATTCTTTCTCAGTTGTTCCCTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACCTTAAGGGCTGCCTAATTTCTCTCTCATCATGTCTTTACTTCTCTCCTAGCCTCATTTCCAGCTTTGGCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTCATAACTAAAGTGTGCTGTGGCCCCAACATGGCATCCTGACTTCTTTTCAGAGTCTGCCTCCAAGCTTCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCTGGTCTTGCCACATACTCCAATTCATATCCCTTCACATTACATCAAGCTGGCTCAGTCTGTCTCTTCTCCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGCCAGACAATGGCAGATCACCTTGGTCAAGCATGTCCTCTGGACCAATTGCCCCAGACCAGGATTATTTAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACAACTCGTCCATCTGCAGTTGTCCTTAAAATCTGATTTATAGAAGGTCTGTGTGGGCTTGGCATTTCTGGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCACTCATTCTGTCTAGTGAATTGTCCTTCTTCCATGACGCCAGTGGTGATAGATCTCACCCTCCTCTGATCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGGGCCTGTTGGTTGTGGAGTTTATGGGCCACTTCTGCAACTTGATGGCCTTGGGCCATGGAAAGGCCTGTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCCTTTTCTGGCACTAGAATGGAAGCTTCAGTAGGGCAGGAACCCTATTTAGGCATTTCAGTTAGGCTTGGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CACTGTCTTGCATGGAGAAAGCTCAGAATAAGACAGAGATCCTAAAGTATCTTCAACAGAACTAATCTGACAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTCCAAGGCTCCTTTGGGAGATAAAATCTACTTGGGGGAATGGGAAAAGGATGTCTACATAGATTTAGAATAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CGACCACCACCACCATCATCATCCTTGACAGAACCTTTATGCCAGGTGCTGTTCTAAAGCACTTTACATACTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATCTCATTTAATCCTAACAACAGCCCTGTAAGATAACTGTTACTATGCCCTTTTTACCTTTAATGAAGAAACAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTCAGGGAGATTAAGAAATTCACCCAAGGTCACAGAGCTAGAAGGTGAAAGAGCTGGATTTCCAACCCAAGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGCCTGATGTCAACTCTGATCTAAGATGTGGACGCACATGGGCAGAATGATGACGTGCTCTTCCCAACCTCTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTAGCCAGCATGTGAGAGGGCAAGGTGTCTTCAGCAACCATTTCATTTGTAAACATACGTGTTTTTATCCTTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTCTACGCAATAGTATTACCACACAGGTAATACCAGTGGGTGCTGGGTGTTTTTTTTTTTTTCCTCTTCTACAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTCCCTCCAAAATAAATTATTAATTGCCCCTCTTCTAAATCTTATGTCACAGTCTTTAATGCCTGCATCTGAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTGCTGTTAAAACATCTCTTGGAGTCGTTCCCTGTGATATTACAGTCCGGGTTCCTGCGGCGTAATCCCACTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGTTTTTCCCTTTGCATTGCATTTGGGTGATGAATGGCCCTTTGATGTTCCTGGCATCTGCCTTCCTGCCTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGGAACTCACTGCTGGGTCCTCTTTTCCCTGCTAATGGCCCTGTTTGCCTTCCACGACAGTTGAGACTCAGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CACTTGCACCCACGGCACCTTTGGACATTGCAGTTTGCCTCTGTTTCACTGCCCTTTCTTCTATTTTTCTTTAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCTGCCTCTTCTGTTCTTTGCTCTGGCCTGCTCCTGTTCCCTGGCAGCTCCAGCCATGCAGCAAACAGTCACCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTCTTCACTTTATCCTCAGAACTGGTGACACAGCACCTACTCTCCTTATCTCTGTAGAGGCTTCCTCCAAAATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCTATTACTTAACCCTTTCTCCTAGACTCCTCCTTGCCGCTCATCATGGCTGAGGCCCTGCTCAGATCTGTTTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCTCAGTTCTTTGGGAAAGCAGCTGTCTGACATTGATGTGCATTTGTTTAGCCTTTTCTATGTGTCAAGCATAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTTTGTATAGTCATAGAGGTGGATAACATAGTCTTAGGTGCTTTTCTTCTTTTTTTATAGACTGCGTCTTGCTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGTCACCCAGACTGGACTGCAGTGGCACAATCACAGCTACCTGTAACCTCAAACTCCTGGGCTCATGCAATCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCACCTCAGCCTCTGGAGTAGCTGGGACTACAGGTTTGTGCCACTAAGCCTGGATAATTTTTTAAATTTTTTG 3182
Query 1 ----------------------------------------------------------ATGGAGTCTTGCTCTG 16
|..|||||||||||||
Sbjct 3183 TAGAGATGGGGTTCTCGCTATGTTGCCCAGGCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTG 3256
Query 17 TCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACC----AGGTTCAAGCGATT 86
||||||||||||||||||||||||.|||||||..|||||||||||||| .||| .|||||||||.|||
Sbjct 3257 TCACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTC----CACCTCGTTGGTTCAAGCAATT 3326
Query 87 CTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG--TGCCCACCACCA----CAGCTGGCTAATTTTTGTA 154
||.|||.|||||||||||||||||||||||.|||||| || ||.||||| ||||||..| |||||.||
Sbjct 3327 CTACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATG--CAACACCATGCCCAGCTGATT--TTTTTATA 3396
Query 155 TTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGC 228
|||||||||||||..||||||.|||||.||||.|||.|||||||||||||||||||||||..||.| |||||||
Sbjct 3397 TTTTTAGTAGAGAGGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAATGAT-CGCCTGC 3469
Query 229 CTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT-------------------- 282
||..||||||||||||||||||||||.|||..|.||||||.|.|||||||| |
Sbjct 3470 CTCAGCTTCCCAAAGTGCTGGGATTACAGGCTTAAGCCACCGTGCCTGGCC--TGCCCAGGCTTTTTAAAAAAT 3541
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3542 AGATTTTATTTTTTAAGTCTTTGGTCCACATAACCACAGCCTCCCCTACTATCAACATCCCACACCAGAGCAGT 3615
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3616 ACATTTGACATATTCGACGCACCTAACTTGACACATCATTATCACTCAAAGTCCACAGCTTACTCTAGGGCTCG 3689
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3690 TTCTTGGCATTGTGCATTCTGTGGGTTTTGACAAATGTATAATGACATGCGTCCACCATTGTAGTATCATCAGG 3763
Query 283 ----------------------------------------------------------------------- 282
Sbjct 3764 AGTGGTGTCATGGCCCTATACATCCTTCATGTCTTAGGGATTTTTAAAGCCTAGTAAAAGACATCGGAAAA 3834
