Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_027442.2
- Aligned Length:
- 3581
- Identities:
- 247
- Gaps:
- 3299
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGGGAGGCTGGAGGCCGGGAGTAGGGGTGGGGAGAAGAGCGTCCCGGGAAGCTGAACGCGTGCCGCGCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCACGGTGCTTAGGCTGGGTGCAACCTAGAACGGAGGTTCCTTTCGTACCGTACATCCAGGTTTGCACAGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTTATGTCCCTCCTCCAATCTGATCTTGCACCAGCTCTGCAGTAGTTTTTCTTATTATCCTCATTTTACGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAGGGAGCTGTGGCTTAGAGAAGTTAAGAGACGTGTCCAAATTCATACAACCTGTTGGGCACCTCTTTATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGAACGCTGTTCTAGGGGATAGGGTTAGTGAACAAAAAACGCAAAAGCCCCTGACCGCCTGGGCCTTACATCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAGGAGGAGGAAGACAGATAAACTAAGGCTCGTGCAAAGGAGAAAAATAAAGCAAGGTGACTTTCTGCAGACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCGGACTCACCAGTGGTGTTTCATTCTATTTAATGTCATCCTATTTCATGCCTTGCTTTTTGGGACTGACTTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAGGAATACTTTCTGCATTCTTTGCCTTATATAGATGTGAAAGTTCTTGAAATTAAGAATAAGGCAAGAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGAACATCGAACCCCTAAGAAGTAATCTCTCCAAATATTATGTCCTGAGCCAGTCAGAAATATGTAAAGGGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAACATTTTTTTGCTGTCTCTTATCTTCAGTAGCCCAGGAAATGGAACAAGACGGGACCTCATTAGGAAAACTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCTGGGAATGCCTGTTTCGGTAACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCCAGAAAGAGATCAACAAAGAATCCTGTAAGAATAATGATATAATTGAAGGAATCTTCTTGGACAGTTCTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAACCAAACCCTGAAGATCATTGCAATGATACAGTGGGCTGTGGCTTTCTGCCCTAATGCCCTGTTCATTCTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGTGGATGAAGAGACGTTTGTCAATCTACCAAGCTTGGTAGACTATCTTCTCAATCTGAAAGAACACCTAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATATCTATGTAGGAAGAGTTCTTCATCAGGTTACACCCAATAGAGATCCTCAGAACAGAGACTTTGTCCCTCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGTGAGTACCCAGAAAAATACTACCCAGATTACTGCAGTGGTGAGGCCTTTATAATGTCCCAAGATGTGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAATGATGTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTGTAGGAATTTGTGCTAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCATTGGCCTTATACCCATCCACAGCTCAAGGTTTTCTGGGAAAAGGCACATTAGATACAACAGATGTTGCTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAAGTTCATTTTTACATCCTCAGAAATTGCAGATCCTGAAATGCCCCTAGCATGGAAGGAAATTAATGATGGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGAATGTACACTGTTTGAGACATCCTATGAGCTCATTTCCTGCAAACTTCTGACGTACCTTGACAGCTTTAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGTTTTCACATGGGGACCATAAAAAACAATCTCATGTATTTTGCTGATTAGGATTTCTTTAATTTTCCTTATGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCTACTATTTTAAAGTTACCTTCTACCCTGTTATGGAAAGCATCCCTTCTTTCCCATGTTTTATGTAGGTTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGAATCTTTAATTTTATTTGCAAAGGTACAAAATGTTTTCTGTGCTCTGGTGTGCTCAATTACTGAGATCTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATTTTTAAAAAATTTAAGTTGGTGTAGCATAATTCTTTTCAAAATGAAATATTTCTCTCAAAAGAGAGAACAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATGTTTCATTGTTTATTTAGTTTTCGTTTTTTTTTTTTCTTTTGAGACAGGGTCTGGCTCTGTCACCCAGGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAGTGCAGTGGCGCAATCTCGACTCACTGCAACCTCCACCGCCTGGGCTCAAGGGATCCTCCCACCTCAGCCT 1924
Query 1 -------------------------------------------------------------------ATGGAGT 7
|..||||
Sbjct 1925 TTTGAGTAGCTGAGACTATAGGCATGTGCCACCATACCCGGCTAATTTTTTTTTTTTTTTTTCGGAGACAGAGT 1998
Query 8 CTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAG 81
|||||||||||.|||||||||||||||||||||.|.|||||...||||||||||||||||.|.|||||||.|||
Sbjct 1999 CTTGCTCTGTCGCCCAGGCTGGAGTGCAATGGCACCATCTCTGTTCACTGCAACCTCTGCCTCCCAGGTTAAAG 2072
Query 82 CGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTT-GTA 154
|.|||||||||.||||||||||..||||||||||||||||||||||..|||||||..||||||||||||| |||
Sbjct 2073 CAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCTGCCACCACGCCTGGCTAATTTTTGGTA 2146
Query 155 TTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGC 228
||||||||||||.|.||||||.|||||.||||||||.|||||||||||||||||.|||||.|||.|||.||.||
Sbjct 2147 TTTTTAGTAGAGGCGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAAGTGATCCACCCGC 2220
Query 229 CTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC--ATT------------------ 282
||.|||.|||||||||||||||||||.|||.|||||||||..||||||||| |||
Sbjct 2221 CTGGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCTGGCCTAATTTTTGTATTTTTTTATAGA 2294
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2295 GATGGGGGTTTCATGATGTTGCCCACGCTGGTCTTGAACTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCC 2368
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2369 CAAAGTCCCAAAGTGTTGGGATTATAGGTGTGAGGAACCGTACCTGGCCAGTACACAATTCATTATAACTAAGT 2442
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2443 TTTTTTTTTTATAAACTGACTAGTAAAAATTATGTATATTTATGTTGTACAACATGTTTTGATATATGTATATG 2516
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2517 TTATAGAATGGCTAAATCAAGCTATTTAACACATGCATCACCTGACATACTTTTTTGTAGTGAGAACACTTAAA 2590
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2591 ATCTACTCTACTAACAATTATCAGATATTGATATATTGCTGTTAATTGTCATGACCATGATGTATGATAGAGCT 2664
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2665 CTTGAACTTATTCCTCATGTCTAACAAAAATGTTGGATCTCTTGGCCATATCTGCCAAGTTTTCCCAACCCCCA 2738
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2739 GTCTCTGGTAACCTCCATTTACTCTCTGTTTCTATGAATTTGAGTTTTTTTACACTCCACATATAAGTGAGCTC 2812
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2813 ATGTGCTTATTTGTCCTTCAATGCCTGGTTTATTTCATGTAACATAATGCACTCCAGGTTCATCCATGTTGTTG 2886
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2887 GAAATGACAGGATTTCTTTCATTTATAAGGCTGAATAGCATTTTATTGTGGATATATACCACATTTTCTTTATT 2960
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2961 CATGCACTGGTGGACACTTAGATAGATGCCACTAATCTTGTGAATAATGCTGCATTGAATGTGGGGAGTGCAGA 3034
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3035 TATCTCTTTAACATACTGATTTAATATCTTTTGGATATATTTCCAGTAGCGGAATTGCTAGATTGTGTGGCAGT 3108
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3109 TCTATTTTTAATTTTGTGAGGAACCTCCATAATGGCTGTATTATTGGTTTACCATAATGGCTCATTGTGGTTTT 3182
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3183 ACTTTGCATTTCCCTGATGATTAGTGGTATTGAGCATTTTTTTTTCATATACCTGTTGGCCATTTGTACTTCTT 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 CTTTTGAGAAATGTCTATTTAGGGCCTTTGGTCATTTCTAAGTCAGGTTATTTGGGCAGGGCACAGTGGCTCAT 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 GGCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGGTCACCTGAGATGGGAATTCAAGAGCAGCCTGGCC 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 AACAGGGTGAAACCCCGCCTCTACTAAACATACAAAAAATTAGCTGGACCCGGTGGTACGTGCCTGTAATCCCA 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 GCTACGCGGGAGGCTGACACAGGAAAATCGCTTGAATCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCC 3552
Query 283 ----------------------------- 282
Sbjct 3553 ACTGCACTCCAGCCTGGGCAACAGTCTGA 3581
