Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_028458.2
- Aligned Length:
- 6787
- Identities:
- 245
- Gaps:
- 6505
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGAAATGAAAGATCATTTATATGCAATTATAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGGTGATCTGCCAGATTGCGAAGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGTTAGACGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAGACATCAGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAGTAAAGTAGTTGACAGCAGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAAAATAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTCAAAGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGGACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCTAAATGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTTTGCAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAAGTTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACTTTCCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCAGTGTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTTTGAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGTGCGTTCCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGTGCTTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGTTTTATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTGCTTCAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAAAATATGTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTACTTAGTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTCTTGCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTCCCTATC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAATTTCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAGGGAAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTATAAAAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCCCTTACA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTATAAAACT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAGACTGAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTTTCCATTGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCAATATGCATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATATGGCATGTT 3034
Query 1 ---------------------------------------------------ATGGAGTCTTGCTCTGTCACCCA 23
|.|||||||||||.||||.||||
Sbjct 3035 TGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGTCTCCCA 3108
Query 24 GGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCA 97
||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||||||||.||||
Sbjct 3109 GGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCA 3182
Query 98 GCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGG 171
||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.||||||||..|
Sbjct 3183 GCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGAGACGCG 3256
Query 172 GTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGT 244
||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||||||||.|||||||||
Sbjct 3257 GTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAGT 3330
Query 245 GCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT--------------------------- 282
|.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3331 GTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACACTGG 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 ATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCACTAGTGA 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 ACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGCCAGTAT 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 GAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATACATCAG 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 GTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTGCTAAGA 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 AGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACTATTGGTATC 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 ATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTAAGCCTT 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 GGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGAATAGTT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 AATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATATAAACTGTTT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 GAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAATATTTTATTT 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 AAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTAAATGAG 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 GAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAATATTAAGTT 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 GAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATACTATTTTTAA 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 AATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGTGGGTGG 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 ATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTACAAAAAT 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAACCCT 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 GGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTCTGTCTC 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 AAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTGTACAGA 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 TAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTTGATGTT 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 TTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCTGTAATC 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATGGTG 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 AAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTACTCAGG 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 AGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCCTGC 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 CCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTATATATATATG 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 TATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCCAACACT 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 TTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCA 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 TCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGAGGCTGA 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 GGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTAGCCTGG 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 GCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTTGGGCCG 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 CTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGCCCAGGC 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 TGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCC 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 TCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGACGGGCT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 TTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGA 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 TTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGAGTCCTT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 AAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCAATGTAAATA 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 ACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTTTGCTTT 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 AAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCTTTCATG 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 AGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATCTTTGCT 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 ATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGTCGTAAT 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 TGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAACATTAGT 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 AAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGTTTTC 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 TGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATCTAATTTTTA 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 CAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTACAGAAA 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 ATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCC 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 AGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTTCCTGTC 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 TGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTTCAATGA 6734
Query 283 ----------------------------------------------------- 282
Sbjct 6735 GTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6787
