Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_028462.2
- Aligned Length:
- 6775
- Identities:
- 245
- Gaps:
- 6493
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGAAATGAAAGATCATTTATATGCAATTATAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGGTGATCTGCCAGATTGCGAAGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGTTAGACGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAGACATCAGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAAAATAATTTAGATATTCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTCAAAGAGATGAGGAAATAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGGACTAAATAATGATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCTAAATGTTTCTTTTTCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTTTGCAGACTAGCTAATTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAAGTTGGCTCACATCATGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACTTTCCTGATGTTGATAATA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTTGTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTTTGAAAGATGGTAATCTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGTGCGTTCCTAAACTCTGAAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGTGCTTTCCCAGATGCTTTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCGCCTTATTTTTTCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGTTTTATTTTATTTTTTCTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTGCTTCACATCTTTTAGTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAAAATATGTTTAAATTTATACTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTACTTAGTGGATCTATAAATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTCTTGCTGGGTCAATAGGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTCCCTATCCCTCATTCTCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAATTTCAGCTGACAACTTCG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAGGGAAAGTTTTTTGATCTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTATAAAATAGCTTTTTCTTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCCCTTACACAAAAGGATAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTATAAAACTTTAAAACTGCAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAGACTGAACATTTATGTTAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTTTCCATTGAAAAGTTACATTAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCAATATGCATTTTAAAGTTTTAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATATGGCATGTTTGACTTTTAGTT 3034
Query 1 ---------------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCA 35
|.|||||||||||.||||.||||||||||||.|||
Sbjct 3035 CCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGTCTCCCAGGCTGGAGGGCA 3108
Query 36 ATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTA 109
.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||||||||.||||||||||.|||||
Sbjct 3109 GTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTA 3182
Query 110 GCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCAT-A 182
||||||||||||||.|||||||||||||.|.|||..||||||||||||||.||||||||..|||||.|.||| .
Sbjct 3183 GCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGAGACGCGGTTTCATCATGT 3256
Query 183 TTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATA 256
||||||||.|||||||||||||||||||||||||||.|||||||||||||||.||||||||||.||||||||.|
Sbjct 3257 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAGTGTTGGGATTACA 3330
Query 257 GGAGTGAGCCACTGCGCCTGGCCA---------TT--------------------------------------- 282
||..|||||||||||||||||||| ||
Sbjct 3331 GGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACACTGGATGCGTTTGAAT 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 GTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCACTAGTGAACTGTCATCTTG 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 GTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGCCAGTATGAAAAGATGCCA 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 GTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATACATCAGGTACTGCCATTT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 ACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTGCTAAGAAGTGTATTAAAG 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 ATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACTATTGGTATCATTTTTCTAATG 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 TATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTAAGCCTTGGAAATACCACT 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 TTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGAATAGTTAATCTCTGATCT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 AAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATATAAACTGTTTGAAAAGGCTGCT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 GCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAATATTTTATTTAAGGTGGTGCTT 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 TTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTAAATGAGGAAAAAAACTCA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 AAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAATATTAAGTTGAATAAAATAAA 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 TTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATACTATTTTTAAAATCATGCTAGT 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 GGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGTGGGTGGATCACGAGGTCG 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 GGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTACAAAAATTAGCTGGGCGCG 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 GTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAACCCTGGCGACAGAGGA 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 TGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 AAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTGTACAGATAAAAAATAGAT 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 TCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTTGATGTTTTAAATTCTTAC 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 GAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCAGTTCTG 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 GAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATGGTGAAACCTCGTTTC 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 TACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATC 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 GCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAGTGA 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 GACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTATATATATATGTATATATATATG 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 ACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGA 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 GGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAA 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 ATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATC 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 GTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTAGCCTGGGCAACAAGAGTA 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 AAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTT 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 TCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGCCCAGGCTGGAGTACAATG 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 ACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTACCT 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 GGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGACGGGCTTTTACCATGTTA 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 GGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGCAG 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 GCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGAGTCCTTAAGTATGGATAT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 ATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCAATGTAAATAACTTTATTTTTC 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 ATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTTTGCTTTAAAAAATGACCT 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 GGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCTTTCATGAGTGAAGATTAT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 TGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATCTTTGCTATTATTATTTTT 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 TCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGTCGTAATTGGCATGTTTAA 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 TAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAACATTAGTAAAATATAAATG 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 GATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGTTTTCTGAATTTTTTTA 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 ATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATCTAATTTTTACAACACTGGGCT 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 ATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTACAGAAAATATCTGAAACA 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 AAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCC 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 CTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTTCCTGTCTGGTCGTTAGAA 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 AAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTTCAATGAGTTGTATTTTAA 6734
Query 283 ----------------------------------------- 282
Sbjct 6735 ATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6775
