Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_028465.2
- Aligned Length:
- 6807
- Identities:
- 245
- Gaps:
- 6525
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAAAGATCATTTATATGCAATTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGCAAGGTAGTTCCAGAAACATATCTCAAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCGGAAGAGACGAGAAGCCTACTTTGAAAATCACAACTCAGAAGTAGATGAAGGAAAATTCTGATCAGCTGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAATACCTTTAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGGTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATGCGTCGGTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAAAATAGTTTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCTTGGATCTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAGTATCTCTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACCGTGTGCTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCCACAATTCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCATGACTGGTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGTGTGAGCATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAACCCCTTCTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTTTAATAGCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATGTAGGTGTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTACTAATGAAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGAAGTCACAGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTACAGAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGTTTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAAAATCCAAGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACACATTTTATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTATTTATGATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCTGAAGTTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTCAGAAGAATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTAAATATTTTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CATTACCTTTTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAGAAAACCAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCAC 3034
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 3035 TTAAGAAAATATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACG 3108
Query 4 GAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTT 77
||||||||||.||||.||||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.||||
Sbjct 3109 GAGTCTTGCTATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTT 3182
Query 78 CAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTT 151
|||||.|||||||||.||||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||
Sbjct 3183 CAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTT 3256
Query 152 GTATTTTTAGTAGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||||||||.||||||||..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||
Sbjct 3257 GTATTTTTGGTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGC 3330
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT------- 282
||||||||||.||||||||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3331 CTGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAG 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 CAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGC 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 AGATCCAGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTT 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 CTTAATTGATTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAA 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 AGCTATAGTTTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCA 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 CAAGAACTGTCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTA 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 ATATTTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATG 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 CTAGTAGAAGTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 TTTTAAAATTCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATAT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 TTCAGTAATATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACA 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 ATTCACAGAATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTC 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 ATGATGCCAAAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCC 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 ATATTGTTTAATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGA 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 ATTTTTGATACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTT 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 TGGGAGGCCGAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCT 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 GTACTAAAAACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGC 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 AGGAGAATTGCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCG 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 ACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCG 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 GCCCATTGGACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTA 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 GAAAAATAAATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGC 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 AGTGGCTCACGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGA 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 CCAGTCTGGGCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACT 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 TGTAATCCCAGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTC 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 ACCACTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATA 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 TATGTGTGTATATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTC 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 ACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTG 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 GCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATC 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 CCAGTTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGT 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 GCCATTGCACTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGA 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 AACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAG 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 TCTAGCTCTGCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAA 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 GCGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 TTTTTTAGTAGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTT 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 GGCCTCCCAAAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 GTTTGTTGTATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAA 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 TCATGTCAGCAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTAT 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 AACCAGCATCTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 TGTTCTAATTTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTA 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 ATTTGAAGAAAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTA 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 ACTTCTAAATTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 AAGCAATGAGAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGC 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 ATAGTTCAAGGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAA 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 ATGTGATTATCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATAT 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 TTGAAATTCAAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCA 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 GTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTA 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 CACACACAGGCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTG 6734
Query 283 ------------------------------------------------------------------------- 282
Sbjct 6735 TTAGTGTGGATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6807
