Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_033710.1
- Aligned Length:
- 5955
- Identities:
- 249
- Gaps:
- 5683
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTTGCGGGATCTCACAGGCTTTAAACCGCGGCGCCGCGGCGCCCGGGTGTGGATCCCTAGATGGGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATGGGCCGGGTGCCTGGTGGGTGGCAGTCGGGGCTGACGGCGGCGGCACTTTGCCGCCTCAGGCCCTGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCACCCCGCCGCCTGCCCAGGCGGGCCGGCCCTGCCCGTCCACCGGCCGCCGAGAGTCCCCGGCCTTGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCGGGGCCGCTGACTGGCCTCGGTCACCTCCCGGGGAAGGCTCCCGCGCCTCCATCTGCCCCCGCAGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCCTCTTCTCGCCCGCGAGGCTTCTCCGGGTGGGATCGTCCTGGCCCCCAGCCCTAAGGGATCCGCCCCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAGCATCCGCCGCCCCTCGGAGACCACTCCAGCTCGGACGGACCCACTCCAGCCCCCGCTGCACGCGGAAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCATCCTCCCCGCCTGCCCCGTTCCCTCCCCCTTCTCCTGTGGGACAACCAGGGACCGCAGCTCCCCGCTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGTGTGGGGGCTCCGACACGAACGCCTCTGCTCGCAGGGCGGTGAGCGCAGATCCCACGGGTCCCTCGGTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGTCGAGGCTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGGAGTTCACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTTACTGCAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAGCACGGCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCGGGCTGCGGGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTACGTTTACGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTGTGCGTGGCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGGTCTGTAGGGTAACTCCCCACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGATCCTCTGAGATGATTGTGGACTGGGTGCTGTGAGTCCTGCCACTTTGTTTAAGTGAATGTGTCTTTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCCACGCCCTGGGGAGGATCCACTGGATCACCGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGAGAGCAGGTGGGACTTTCTACAACGCTGCTGTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCACTCCGGACACTGTGTTTTCTCTGGGACATGTCTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTGTGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGACCAGGACGTCAGCCAGCACTGCACAGACAGCTGCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAGAGACTGGAGGTGACCCTTGCCCTTTTCCACCCTTCGCCAGTCCACTGTGAAAAGCTGGGTTGATTGTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGTTAGATAGAGGTCATCAGCCGGGTTGATTGTGTGGGTTAGACAGAGGTCATCAGCCAGGTTGATTGTGTGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTTAGATAGAGATCATCAGCCTGGTAGATTGTGTGGGTTAGATAGAGGTCATCAGCCAGGTTGATTGTGCGGGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGATAGAGATCATCAGCCGGGTTGATTCTACAGGTTAGATAGAGGTCGTCAGCCGGGTTGATTGTGCGGGTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATAGAGATCATCAGCCGGGTTGATTGTGCGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTGTGGGTTAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAGAGATCATCAGCTGGGTTGATTGTGTGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTGTGGGTTAGATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGTCATCAGCTGGGTTGATTGTATGGGTTAGATAGAGGTCATCAGCTGGGTTGATTGTACGGGTTAGATAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGTCGTCAGCCGGGTTGATTCCGCAGGTTAGATAGAGGTCGTTAGCTGGGTGTGTGGGTCCCAAGGCGTGCTGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGATGGAGAATCAGAATTCCTTGGGCATCACCGGGCGGGGCATGTCCCTGTCCCTTCGCTCCCAGACCCAGGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGCCGCTACCAGGACTCCTATCGAGAGCTCTTCAGACACTTTGTCAGAACCCTTAAAGGTGGGTGACGTTTTCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGAGGAACCTGGGATGTCCTGATGCTCAATGGGTAGATGCCTTCCAGGCTGCAGTCAGTGCAGATGATATGCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATTTCAGGTGGAAAATTGCATTCCAGATACCGGGTTCAGATTTGAAATTGTCCATCTCAGTGATCATTTACGTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCGTGTACTTGAGGGAGATTCTGAGAGATGCTCCTTTGGGGTTCTGTGCGTGTACCATGTTGCCTGACACGTCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TGAGAAATCTTCTTAAACTCTGAGTTTATAAAATAACTACTTCTGAACTCCTGAGATCTAGTGGATACCATGTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCCTGGAAGATAGGACACTTTCTACCCTCTGTCAGTCCTGGGGGTGACTGGGAACCAGAGAGGTTGAGCAGAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TCCTGGACCTGGGTGGGGCTTGTCCAAGAGGGGCAGGTGGGCCTCTCTAGGATCAGTGTCCCACCCAGAGGCCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTGGCCCCTTCACATGCCCCAACAAGAGGAAGACTGTCTGGCTCCGCAGTGTTGGGTTTTGTCCTGAATCTGTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAAATGTGCAGGGAAATAACCTCCTGAAATCACCAAAGAGCAGTTCCTCAGGGCCTTCCGGGTGACCGTGGCCG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGAGCAGTCGTGGTGAAACCGGTCAGCTGTGGACCTGCCCTGCGAATCGGCAGAGGCCTCCGTGGTGAAGACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAAGCTCCGTGAACCAACTCGAGGCTGGAGCCAAGATCCTGCCTGATATCCAGTTGCCTGTTTCACTTGTTACT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTTACTGGGAGAGGGAGACAAAACCTCATGGCAATCTTGTCCTCACTGGAGACTCAGAAGGGGAAGCATTGGGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AACCATGTATGTTTCATTTCTGGTTTAACCAGGCTTTTCAGGATGGGACTTCAGACCAAGGACACAAGTTGGGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TTGCTTAGGTGTTTTGTGTTGTGCGCAGGCCTCAGAGATGCTCTTCCGGTCAGAGTTCCCTTGGCAGGGCCTTG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GAGGCCTCTGGTTGGCTCTCTCAGGAAGAGGGCAGGTCAGGGATTGGGCGGTGTAAATTGACTCAGAAACCTGC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GGTTTCAGCTTTTCTGTGGCAAACAGGGCCGAGGGCTGGTGAAGCTGTTAAGGCTAAATGTCGCATGCATGAGG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CGGGCTGCAGGCCTCCTTAGGCCTTTTTTGGGGTAATTACACCAGTATTTAAAAACATTTTTTTTTGTTTGTTT 4070
Query 1 ----ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTA 70
||||||||||||.||||||||||||||||||||||||||.||||||||..||||||||||||||.|..|.
Sbjct 4071 TGAGATGGAGTCTTGCCCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTC 4144
Query 71 CCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACA----GGTGCCCACCACCACAGCT 140
||||||||||||||||||.|||.||||||||.||||||||||||||||||| .||| ||||||| |||
Sbjct 4145 CCAGGTTCAAGCGATTCTTCTGCCTCAGCCTTCTGAGTAGCTGGGATTACACGCGTGTG-CCACCAC----GCT 4213
Query 141 -GGCTAATTTTTGTATTTTTAGTAGAGACTGGG-TTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCT 212
||||||||||||||||||||||||||| |||| |||.|||||.||||||||.|||||||||||||.|||||||
Sbjct 4214 CGGCTAATTTTTGTATTTTTAGTAGAGA-TGGGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCT 4286
Query 213 CAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCAC--TGCGCCTGGCC----- 279
| |||.|||.||||||.||||.|||||||||||||||||||.|||.||||||||| |||.| ||||
Sbjct 4287 C--GTGATCCACCTGCCATGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCTC--GGCCTAAAA 4356
Query 280 ----ATT------------------------------------------------------------------- 282
|||
Sbjct 4357 AACAATTTTCTTGAAGAATCCGATTTTGTGCATAGTAATGACACAGCACCATTCCTGAGAAATAGGAAATATAT 4430
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4431 GTGTGTGGTATGAAAAGCCCATATTCTGTTCTTGTCACCTGAATCTAGGCTTCCTCTTTGGATGTGAACGCGGG 4504
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4505 AATGAACAGTGGCTGTTTTCCACCCAAAGGGGCGTGGAGACCTTTTGGAAACGGGCTTTCTCCTTTCCATTTTG 4578
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4579 CAGCCGGGGGCGGGTGGAAACCTTCCTTCGAAGGGTAGTGCCTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGC 4652
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4653 TTAGCTTTCCAAAATTCTGTGTGGAACTTACTGGAGATGTTTTTATATATTTGAAAATAATGGCCTGTATTTCT 4726
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4727 CACGCTATACTTAAAAAAAATAACTAACCTTTTAAACAAAGATATTCAAACTCACCCTTGTGCTGAAAGCACTC 4800
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4801 ACATTTCTGTGTTCATTCCTGAAAGGGCGTTTTAGAGTCCCCGTTTCTACGTTCTATGTGGCACCCTCTTGCCG 4874
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4875 AGGGAACATCCAGAATCCCTCCACTTCCTGTCTAGTTTGAGGCCTCAACACCTTCATGATCCAGAGTCCTGCGG 4948
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4949 CTATGAGGGGGTGGGCCCACCACCGCCCAGCCCTCCTTGGTGGACGTGGGGACAGGTAGGAGCCTAGGGAAAGG 5022
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5023 GGTGGGCGGGCTCTGGTGTGACGGCGTGAGCGCTAGCCAGGAAGATGGGGCCAGGGCTTGGCATGGCACCTCAC 5096
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5097 CTGTGGGGGAACTCGGCGGAGCTTCCTGGCGGCATCTCCCCCTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAG 5170
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5171 GCCAATTTCTAAAAAGACTGAGGCCTCCTTCAAGGTTGAACAGATTTCTAGAGCCTTGTTTTTGCTGTGACAAG 5244
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5245 TCCCTAGTCCCTGTTCACAACTCTGAAACCAAGAAACCTGAGAACCAAGAGAACTGAAATGAAGCCCGTTGGTC 5318
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5319 TCAGCCTGGCTTGAGCCAACATGAGGCTCTCTGCTGCCTTTTGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTG 5392
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5393 CGTTCTGTGTCGGTGTTTGTGACGCCCTGAGACCCTGCTTGGCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCAC 5466
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5467 AGGGCTTGGATGAGGGCTCATGGGCCTGTACTTCAGGAGGCCTGAGAGGCCCGGTCAGTCCCATGAGGCTACTC 5540
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5541 GGCTTGGCCCGCAGGTCCTCCGAGGCACAGGGCAGAGGGACACCCCAGGGACCCATCAGACTCACGACACAGAG 5614
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5615 AAACTCAAGTGGGGTGCCAGGGCCGGCCACAGAGGCCACGGGCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTC 5688
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5689 TGAGCCCTTTGGAGATTTAGGTTGAGTCATGAGAACCGGTCATTGGAACATACACTTTATTATGTTACAAAAAC 5762
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5763 AAAAATCCCCACTGAAACACAGCTAAAAAAATAACACATTTTCCCAAGATTACATTACCAAAAACAGTTGTTAT 5836
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5837 GTCATTGGAGGGCGTCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTCGTT 5910
Query 283 ----------------------------------- 282
Sbjct 5911 TTCACCTTAAAGCATTAAAGTGCTTTAACTGGTAA 5945
