Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_037582.2
- Aligned Length:
- 5543
- Identities:
- 243
- Gaps:
- 5265
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTCTGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCAAGAAATTCAACAGCAGATTGTTCGAGAGACTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCTGACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACTTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCTTGGACCTCATCCAGGTTTTTGTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAACATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGAAATCGTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGGCTGTGTCTGCTGTGAAAAACATCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTTTGTGTCTGGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGAGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGCACCACAGACTTCTGAGGTCCTGTGCCCTTTACTTGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAAGGGCAGAATTTTAGGAGAACCAGAGTCACCCGCTGGCTCTA 1184
Query 1 ---------------------------------------------------------ATGGAGTCTTGCTCTGT 17
.||||||||||||||||
Sbjct 1185 CTGAGATTGTTACACCCAGAATCCTTTTGTGTTTTTTTGTGGTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGT 1258
Query 18 CACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCT 91
|||||||||||||||||..|||.||.|||||..|||||||||||||||||.|.||.|||||||||..|||||||
Sbjct 1259 CACCCAGGCTGGAGTGCTGTGGTGCAATCTCGGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCATTTCTCCT 1332
Query 92 GTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTG----GCTAATTTTTGTATTTTTAG 161
||||||||||||..||||||||||||||||||..|||||||||| || |||||||.||||||.|||||
Sbjct 1333 GTCTCAGCCTCCCCAGTAGCTGGGATTACAGGCACCCACCACCA----TGCCCAGCTAATTGTTGTATGTTTAG 1402
Query 162 TAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCT-GACCTCAGGTGGTCCGCCTGCCTTGGC 234
|||||||.||||||.|||||.||||||||.||||.||||||||||| |||||||.|||.||..||.||||||||
Sbjct 1403 TAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGGCTCGAACTCCTGGACCTCAAGTGATCTACCCGCCTTGGC 1476
Query 235 TTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT----------------- 282
.||||||||||||||.||||.|||.|||||||||.|.|||.||||| ||
Sbjct 1477 CTCCCAAAGTGCTGGCATTACAGGTGTGAGCCACCGTGCCCGGCCACCAGAATCCTTTGGTATAGCCAAGCCTT 1550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1551 TTGGTTACCGCCTCATGAAGAATATGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGTG 1624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1625 CAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCACA 1698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1699 CACCCACACATGCCAGAGGTCCCTCCTCACAGAGGAGAGGGCCTGTGTCTGTAGAAGGTTAAAGCTGACAACAT 1772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1773 GTGAAACATCCCAGAATTATGACTCTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGC 1846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1847 TGTGTTGTGAATGATGAGCTGCCTCCATAGGGAACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGAGAACCT 1920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1921 GAGCCAGGGTCACCCTTGTGGGGCCTGGACATGACGCACGCTGGCTGCGACTAGGAGCAGGGCTGCCTCTTCTC 1994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1995 CCTCCCCAAGGTCTGCTTGTGGGCACGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAAA 2068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2069 TGTTCTTTCTGTGGTGGAGTAGGGCCTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGA 2142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2143 GCCACCTTAAGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTCTGGCTGGGGAC 2216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2217 CCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTG 2290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2291 TTTTCCATTTTTGAACAGCGCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAA 2364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2365 AGCTCCATGATAAGCACAGAGATGGGCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGAGGGAAGTGTA 2438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2439 GGTGAATAGATATCAAAACCCCTGATGTCATTCTTTTGAGGGGTTGGATTTTCTTTTTTCTGGCAGACATTTCA 2512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2513 GTACATTCACATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTATTTCGTACCTT 2586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2587 CTGTAAGTTGGCATGAGCAAGATCATTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGACG 2660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2661 AAAGTAGACCCAGCTCCAGTAACCTTCCCTTAGATTACACGGGGCTGAGATCTGAGACTGTTCACTTGACTCCA 2734
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2735 CTGTCCTTTTCTTTCCTCGCTGCTTAAGATGGCTTCTCCCAATGTTATCATCTTCTTTTTTATAGATAAGGAAA 2808
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2809 CTGAGCCTCAGAGAGTCTGACTTCTCACAAACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATC 2882
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2883 ATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAGG 2956
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2957 TGGTAAATGTTATGTTGAGGGTCACAAATCCAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTA 3030
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3031 ATGCATTACTGCAGGACAGCCCTTATGCTAGATTTCCTGGGATAGCCTAGATTTTGAATGTTTTGCCTGCCAGA 3104
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3105 AACCAATGGTTTTAAAAAATCATTGAGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGCC 3178
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3179 TCTTACAATGACATAAAACTGAAGCCCACTTTTTTATTTGGAAAACTCAATCCCTTTGGACAAGCCACAATAAT 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 TTTTCATTAACTACTTGAGGTTGCCTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACAT 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 CTTTTTTAAAAATAGGTTAAGGTTGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 GGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTAGCTAACACAGTGAAAACCCATCTCTACTAAAAAT 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 ACAAAAAATTGGCCAGCCGTGGTAGTGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGGAGAATGGC 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 ATGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCGCACCACTACACTCCAGCCTGGGCAACACAGCAAGA 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 CTCCGTCTCAAAAAAAAAAAAAAAAAAAATAGGTTAAGGTTGTATAGAATACTAGGCTTTCCTTTTTTTGTGAG 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 ATGGGGGTCTCACACTGTGGCTCAGGCTGGAGTGCAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGCCCCG 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 GGGTCAAGTGATCCTCTCACCTCAGCCTCCTAGGTAGCTGGAACCACAGGCACGCAACCACCACTCCTGGCTAG 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 TTTTATTTTTTTAGTAGAATAAGGTCTCACTATGTTGCACAGGCTGGTCTCTAACTCCTTACCTCAAGCCATCC 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 TCCCGCCTTGGCCTCCCAAACATGTTGGGATTACAGGTGTGAGCCACTGGACCTGGCCAAATACTGGGTTTTCA 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 GTGCTCACTGCCACTAATAAAAATCTGAAATTCTTTCATTATGCAATTTCTAAGTGCCTGGTGAGGGCCAAGCT 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 CAGTTCTAGGCTCTGAAGATTAAGAGAGAAACAAGGCTCTGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGAC 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 AGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTT 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 TGTGATATATGGAATATTTAGAGGACAGTAACCCATTTCCCTACGCCCTACCTGATCACATCGTGCCCTGCTGG 4288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4289 GCCATACCCCAAACAGCCCACCTTCCTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTCA 4362
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4363 GGATATCTTGAGCCCTCTCAAATCCCTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCAC 4436
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4437 CACTTCCACTACCATGGAGCCCACTTAGTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGGGA 4510
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4511 GCAAGGCTCAAACCAGGGGCAGCTAAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGT 4584
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4585 CTGTCCATTGCTTTCCAAATAGGATGCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGTAGGGGCTAGTC 4658
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4659 CAAGTTTAGCAATAGCCAAACTGGAGAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCAG 4732
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4733 ACATCCTGATTTTCACCTTCCTGAGTCTACCCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCCC 4806
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4807 AGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAAGA 4880
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4881 CTGTCTCCCTTCTCGGGAGCACTGGAGGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAACA 4954
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4955 GGCCCCTATAGGGAAGCAGTTCCATGAAAATGATTAATTCTTTCCAAAAGACTTAAAATTTTTTCCTATTTCAA 5028
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5029 TTTTCCTTTCAAAAAAGGAAATACATTCATGTAGTTCAAAACTTAAGAAAACAAAAGTCTGTTCAGCAAAAGAC 5102
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5103 TCCCACTCCGGTTCCCCAAACGCTGAGCCCCACCCCCCATCCCTGGTAGCAAGAAGTGTTTCCAATTTTAAGGT 5176
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5177 TAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGTTGTGTTCCGTTTGACCCTGGCG 5250
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5251 GTTGACCTCGGCCCACTAGGATCATGCCGCCCTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCA 5324
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5325 CCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGTT 5398
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5399 TCTGAAGTTACTGGCTGTTTACCCTGCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTGC 5472
Query 283 ------------------------------------------------------------------- 282
Sbjct 5473 TGCATCCCAGCTGCTGGGCACGGTACCTGGTCCATGGCGTTCAATAAATAACTGTTGGATGAGTGAA 5539
