Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_110628.1
- Aligned Length:
- 2348
- Identities:
- 245
- Gaps:
- 2070
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAAGGACCTTCCTCATAATCAAAACTACATTTTCAAAATAATTAAGAAGTGTTTGGGAGCTGTGAGAAGATCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGAAATCAGGGAAAATCCTTTTTCTCCCATCTTGTTCCTAAGGAAACCCACTGCCACGAGATCTGTTTTCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTTGAATGCTTTTATTCCTCATATCTGGGTTTTCTTCTCTTTTCTCCAGCCTCTGCCTCTGAATGTGAAGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACTGGACCAGCTCAGTGTCAAGCCTACAGACATTTCCTTGTTCCTGGGGACTGAGCAGTTTGAAGTTTCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGATGAAAACATCTACTCTGAAGAGACCTGAATGGACAAGAGATGTTTTCCTCTTCCTTACCATAATAAAAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACTGCTCCTGACCACAGGATATGCCTGGTCCAGGAAATGGCCACATTTCCCCCCTCAGGACCTCTACTTGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCTGCCTTGGAAATAAGGAAGCTCAAACTGAGGCAGAATCACAGCGATTTGGAAAATGGTCCAATCAGCTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTGGAAGAGCAGAATCATTGAATATAAAACATGGAGATGTCAGCAGCAGGGGCTGTGAGCTGAACAGCTTCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGAAGAGGATATGGGTGAGAAGGTACAGCAATGGGTACCTCCATTAACAGGTAAGCTGGATCCTCCATAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATAGGCACTAGCTGGTTTTGGATGAAGGTGTCGTAAGATCAGATACACTTTTGGGTGATCAGCATGATCTGGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGGACATGGCAGAGCAGGTGGAAGGGAAGGGACCAATATGTGTCAATAACCATCTATGAGCCAGGCACTTACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGAAGTATAATGTCTTTGTAGTTAGACAGACCAGTAGTGTCTGTTGCTCTGGAGGAAGTTACTTAAACTCACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGACTCAGTTTTCTCTGTATTAAAATGATGACACCTACCTCACTATCTGGCCATTGGGATTAAATATGAGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGTGTGAAAATTTATGTCATATGGTAAGCACTCAGATGTTTCCTGGTGGAACAGCATGGTGTGGATTAGGAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCCAAACTCTGACATCAAGCTGAACTTTTGAAATAGAGGCCTCCCTGCTCACTAGTTGGGCAACCTTGAACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTAGTTAAACTGTCTAGAGCTCAGTTTTGTTATCTGGTGAGATTAATAGCATTGAATGGTGTAAAGCACATTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAGTAAATGCTCATTATTATGATTATAGTTATTAATGTTTATTTAACTTTGAAATAATAATGTGTAGGAGCTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAGGTAGATAATGGAAATAAGAAATTTCTTAGGTCATGGAAGCATGGAGGTATGGAAAATTTTGGAGAACAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAGGAGTCTGGTGAAGTAGGGTGGGGATACTGGGCAGATGCAAAGATTGCCAAGGGTTATATCATAAAGGCCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGATACCAGCCTGGCATCAACTGCCTTAGATTGGGAAGATGCAAAACTGTGGTCTGGAGTCAGCCCTGCAGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTGTTTCCTGACTTTCCATCTTCAATCTCTTTTCTATGCAGTTACCAGAGTCATGTTTTGAAATCTCAAATCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGCATCTATCCTCAAATAGAGGCCTACATGGCTTCCAGTTCCTCCAGGAGAAGGTCCAAATCCCTTAAGATGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTTAAGGCCCTCAAGTGTTCCAGGCTCTGTACGTTCTTGTGCCACAACTATGCCACAACAAAACAGTTTTTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCATTTCTACTTTGTTTTTCCAGCTGTAGAGTCAAAGCCTCAAGAAGGGGAAAGGGACGAATGGACACCAGGT 1776
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 1777 CATGTGCCAGGTAGCTGGGAAATGAATACTTCTATTTTCTATTCTTTTTTTTTTTTTTTTTTTTTTGAGATGGA 1850
Query 6 GTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCA 79
||||..|.||||..|||.|||||||||||||||||||.|||||..||.||||||||||||||.|.|||||||||
Sbjct 1851 GTCTCACACTGTTGCCCGGGCTGGAGTGCAATGGCGCAATCTCAGCTAACTGCAACCTCTGCCTCCCAGGTTCA 1924
Query 80 AGC-GATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAA-TTTTT 151
| ||||||||||.||||||||||.|||||||.||||||||||||||.|||||||||..|||||||| |||||
Sbjct 1925 --CAGATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGATTACAGGTGCGCACCACCACGTCTGGCTAATTTTTT 1996
Query 152 GTA-TTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
||| ||||||||||||||.||||||..|.||.|||||||.||||||.||.||||||||||||| |||.|||||
Sbjct 1997 GTATTTTTTAGTAGAGACGGGGTTTCCCTATGTTGGCCATACTGGTTTCAAACTCCTGACCTC--GTGATCCGC 2068
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA-----TT----------- 282
||||||.|||.|||||||||||||||||||.|||.|||||||||.||.|||||||| ||
Sbjct 2069 CTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCAAATACTTCTATTTTCATC 2142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2143 TCTTAGGAAAGCATATGATGTAAATCACTGTTCCCATATTCAAATTTAAATAATGGCTTACCTTTCCGGGGATG 2216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2217 TTTGTATTTGAATGAAGCAGCAAGTTTTTGCCACACTGTAATACTTTAACTTTACAGATATTTTGACTCCTTCT 2290
Query 283 ------------------------------------------------------ 282
Sbjct 2291 GTTTCTGATTTGCTTTCATAAATGAATAAAAATACATTATTTTACATCAAATTC 2344
