Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_120363.1
- Aligned Length:
- 2538
- Identities:
- 242
- Gaps:
- 2259
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAGAGCAGTTTTGCAATGGGAACTCCTCCGTCTACCTTCTGGTGAAATGGGGTGCTGCATCTGGGTCATTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTAACCACGAAACACAAGATGAAATGCCATGGGGTTACCAGGAGGGCGAGGAGAGATGACCTGCAGTCAGGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAGACGGCTCCTGGAGGGAAATGGGGTTTGGAACACAGTTGGAAGGGCTGAAGCAAGATGTGAGAGCCCTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGAGAGGAGGTGTGTTCTCTCTCTCACCTCAGCTGAACCTGGGCTCAGGAAGCTGAAACTCCTCCATGTGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCTGGTTCTCTCATTCATCACCTGTGTGGCGGGACGGTGCTTTTAGGTCACCAAGCCTCACTACACTCACCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAACATGAAGATGATGATGCCTACCTCCTCCGACTACTGTGCAGATTTAATAGTGCATGGGACAAGGCTTCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGTTTGGCACACAGTAGGTGCTCGGTACACAGCAGCTAACAGTCACGATGTGCATGACACTGTTACTCAGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCCACCCTCTTGGGCTCCCAGGTCATCCTAAATCCCTCTCTCTCTTCACCATGTCTATCCAAAGCATCAGCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCATCAAACAACTGTCTCCTCAAGTTGCCCCCTATTTCAAATTCCCACTGCTCCTGCCCATATTCTGGCCACAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCTCTTACTTGGACAATTTTAAAGCCTCTTGTCTTTGTTTCCAGTTATTTCCTCCACCTGTCTCTTCTGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGGCTACTAAAGTGGTTTTTCAAAACACTGCTCTGCCTAAAATCCTCAAAGTCATCCTCGCTTACCTTTA 814
Query 1 -----------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGG 39
|..||||||||||| |||.||||||||||||||||||||
Sbjct 815 TTTGTATTTTATTTTTCTTTCTTTATTTATTTGAGACAGAGTCTTGCTC-GTCGCCCAGGCTGGAGTGCAATGG 887
Query 40 CGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTG 113
|.||||||...|||||||.|||||||||.|.||.||||||||||||||||.||.||||||||.|.|||||||||
Sbjct 888 CACGATCTTGGCTCACTGTAACCTCTGCCTCCCGGGTTCAAGCGATTCTCTTGCCTCAGCCTACAGAGTAGCTG 961
Query 114 GGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGC 187
||||||||||.||||.||.|||||.|.||||||||||||||||||||||||||||.||||||.|||||.|||||
Sbjct 962 GGATTACAGGCGCCCGCCCCCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGC 1035
Query 188 CAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGT 261
|||.||||||||||||||||||||||| ||.||.|||..|||||||.|||||||||||||||||||.|||.||
Sbjct 1036 CAGGCTGGTCTCGAACTCCTGACCTCA--TGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGT 1107
Query 262 GAGCCACTGCGCCTGGCC------------ATT----------------------------------------- 282
|||.|||..|.||.||.| |||
Sbjct 1108 GAGGCACCACACCCGGTCTCTTAACTTTGTATTGATTGAGTGAGTGAGTGAGTGAGTGAGACAGAGTCTCACTC 1181
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1182 TGTCGCCCAGACTGAAGTGCAGTGGTGCAATCTTCACTCACTGCAACCTCTACCTCCCAGGTTCAAGCTATTCC 1255
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1256 CCTGCCTGAGCCTCCCAACTAGCTGGGTCTACAGGTGCGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGT 1329
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1330 AGAGGTTTTGCCACATTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAAGTGAACTGCCCACCTTGGCCTCCCAA 1403
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1404 AGTGCTGGGATTACAGGCATGAGCCACCACACCTGGCCCTCACTTACCTTTAAATGACTGAGGAGAGAATCCAT 1477
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1478 GTTCTTCAGCATGGGTTAAGAGGCCTTTCATAACTTGGCTGTACCAGGCTCATTCTATCACCACTGCCCACCTC 1551
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1552 CTCCAAGTCAGCCAGTGTCACTCCAGCCACTAGGAACTGCTTAGGATTCTCCCTTTTGCATCTCTAGGGCTGCC 1625
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1626 CCTTCAGTCTAGAATGTTCACTCATTTATTCTATGCTCATCCTTTAAGACCCATCCCAGTTATTCTCTCCCCTG 1699
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1700 GAACAATTCCTGCCTCTTCCCCATGCAGTTAACCTCTCCAGCCTCTGTGCTCTGCAATGTTTTTCTTCATGACC 1773
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1774 CTTTAGAGTTCTCCTCCTATTACATAGTACTTATTTACTGATGTGTGTCTGTCTTCCCTACTAGACTGTGAGTG 1847
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1848 ACTTCCTAGCAGGGGCCCTGAGTGAGGCCATAGGTAGGACCTTGCAGCCTGCCTGGCACATAGTAGGACTAATG 1921
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1922 TCCTGCCAGCCACATCCACAGGTGCCCAGACTATGCATCAGCTTTAAGTGGGTACTGGCAGTATGTACCTGCTG 1995
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1996 GAAGCTCTCACGCAGATGGCTTTGATCCTCAGGGTGGCAGAATTCCAAAATGTCCTTTCCCAGAAGATCCTAAA 2069
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2070 TAAAAGAGACAAGCTTTAATAATCCCAGATCCATTTGTAATTATTTGTATACTCACTGTGATACAACAGTGTTC 2143
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2144 ATTTCCATCTCCTTTAACTCATCTCCTTTAGCCTGTCCCACCCCAGATTTTTTGAAAAAGTGAGTGCAAAATTT 2217
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2218 CCCTGGGAGCCGTCAGAGAACTGGCTTCTTGGTATTCACTCTAAGTTCTTCTGGCATGCTCAATATCCATTTCT 2291
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2292 AATTTTGCTAAGGCACTACATCAGTAGCTTCAGAATGCAATTTTATTTTTGTTTGTCTTGGAGAGGCAAACTGC 2365
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2366 AATAAACATACTTTAATAACATAAAAAGAAAGCAAAATGATAGCCTGAGGACAGATGTGTTGCTTATGAAAACT 2439
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2440 GGAATTGTTTAAATGTGGAAATTGTAGCTCTCCTGTGGCTGAAAAAATGAGGTTATCATAAAATAACTGTACTT 2513
Query 283 ---------------------- 282
Sbjct 2514 GTTAAAAAAAAAAAAAAAAAAA 2535
