Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_134868.2
- Aligned Length:
- 4458
- Identities:
- 246
- Gaps:
- 4177
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGAGAGCAGTAGGTGACCCCTGGGACCCAGGGGAGGGGTTGGATGTGCAGTGTCACAAGAAATGGGTCTCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAGCAGAAGAGAGGTGGGAAGACTCCAGAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCACTGTCCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGAAATGAACCTGCTGGGTAGATGCACCCCCTGAGACAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGACAAGGGCCCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGCTCTGAGGGGGTGTCGGCTCTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGAAAAGACCCCACGTGCCTGGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGACTGGTTGTCACGTGTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTGTGGCCTGTCTGCCACCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCTGGCTCAGAACTTTGGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCACTGGCAGCACTTTCCTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCTGTCCTAAGCATTGAGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTCCCCCACGGCCTTGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACCTGGCCTGGGCTGTGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCTCTACTTCCTCACAGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGCCGTTCCCAAGCACCAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCAGTTGGGCCGGGCGCAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGCCTGGCATGGTGGTGGGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAAAAAAAACGTTCAGTTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATCTGAAGTCAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGTGGTGTCAGGCGCCTGTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAGTTGCAGTGAGCCAAGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAATAATAAAATAAAGCCGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCGCCCTGAAGGCTGCGTCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTGCTCTGTCCCGGGTCCAC 2516
Query 1 ----------------------------------------------------------------ATGGAGTCTT 10
||||||| ||
Sbjct 2517 TCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATTTTTTGAGATGGAGT-TT 2589
Query 11 G-CTCT-GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGC 82
| |||| ||||||||||||||||||||.||||.|.||||...||||||||||||||||..|.||.|||||||||
Sbjct 2590 GTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGTCTCCCGGGTTCAAGC 2663
Query 83 GATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATT 156
||||||||||.||||||||||.|||||||||||||||||||||..|.|||||||..||||||||||||||||||
Sbjct 2664 GATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCTGGCTAATTTTTGTATT 2737
Query 157 TTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCT 230
|||.||||||||.|.||||.|||||.||||||||.|||||||||||||||||||||||.|||.|||.||.||||
Sbjct 2738 TTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCTCCCGCCT 2811
Query 231 TGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC--CATT-------------------- 282
.|||.||||||||||.|.||||||.|||.|||||||||||||||.||| .|||
Sbjct 2812 CGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTGTTTTTAGTAGAGATGG 2885
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2886 GGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTCCTCAGCCTCCCAAAGT 2959
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2960 GCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTATTTTATTTTTTGGATGG 3033
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3034 AGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTC 3107
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3108 AAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCACACCCAGCTAATTTTTG 3181
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3182 TATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGTGCAGTGGCGCGATCTC 3255
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3256 AGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTAACTGGGA 3329
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3330 CTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCCAG 3403
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3404 GATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGGACTACAGGCAAGCTCA 3477
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3478 TGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGGCACGGTGGCTCACGCC 3551
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3552 TGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAA 3625
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3626 GATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCATTT 3699
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3700 ACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCACT 3773
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3774 GCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGTGG 3847
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3848 CTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAACCT 3921
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3922 CTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCCCA 3995
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3996 CCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAGGG 4069
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4070 TGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAGAT 4143
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4144 CAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGCTG 4217
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4218 CCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACAGT 4291
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4292 TCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCTCC 4365
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4366 AGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTACCCATGAGGAATAAAAC 4439
Query 283 ------------------ 282
Sbjct 4440 CATGCAGCAGCATGCAAA 4457
