Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_136206.1
- Aligned Length:
- 3357
- Identities:
- 243
- Gaps:
- 3084
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGC 1480
Query 1 ------------------------------------------------------------------ATGGAGTC 8
|.||||||
Sbjct 1481 CACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTC 1554
Query 9 TTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGC 82
|||||||||||||||||||||||||||.||||.|||||||..||||||||||||||.||.|.|||.||||||||
Sbjct 1555 TTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGC 1628
Query 83 GATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACCA---CCACAGCTGGCTAATTT 149
.|||||||||.|.|||||||||||.||||||||||||||| ||| |||||| ||| ||||||||
Sbjct 1629 AATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTG-CCACCATGCCCA------GCTAATTT 1695
Query 150 TTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCG 223
||||.||||||||||||||.||||||.|||||.||||.|||.|||||||.|||||||||||.| ||||.|||.
Sbjct 1696 TTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCCA 1767
Query 224 CCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGG---------CCATT------ 282
|||||||.|||.|||||||||||||||||||.|||.|||||||||..||||||| |||.|
Sbjct 1768 CCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATA 1841
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1842 ACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCT 1915
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1916 GTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTG 1989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1990 GCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACC 2063
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2064 TGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGG 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 GTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCC 2211
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2212 TCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAG 2285
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2286 AGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAA 2359
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2360 TGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGA 2433
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2434 GGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCA 2507
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2508 TCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCA 2581
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2582 CCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAG 2655
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2656 CCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGA 2729
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2730 CCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTG 2803
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2804 CACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCG 2877
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2878 GCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGT 2951
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2952 GCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCG 3025
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3026 GCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAG 3099
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3100 CCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATA 3173
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3174 TATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAG 3247
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3248 GTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCT 3321
Query 283 --------------------------- 282
Sbjct 3322 GGATACAGTGGCTCATGCCTATAATCC 3348
