Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- XR_001745955.1
- Aligned Length:
- 1688
- Identities:
- 245
- Gaps:
- 1408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAATCATTAGCTTCTTAAGGCAGGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGAGTTACCTAAGTCAGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTATAAGATGTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTCCTAAAGGTGTCATGAAGAAAACTGTTTACCTAAGTGGTTCCTAACACTGACTGAACATCAGGCTTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATCAGAATTTCTGGTTGCAGAGCTTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCGCACTGTTTTTTAAAACTTCCCCAAGTAATTCTATGTCCAGTCATTTAAATACTGGTCCCCACAACCCAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACACATTACCCTCTATTAACATCAAAGATTATGAGATGGTTTGAATAGTCATAGAACTTTTGAAAGAAGTAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAAGGGAAGAATTACAGTTAACCACACTCCTTAAGGATAATTGTTCTGGACAGCTAGCTTCCCCACATTGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGGTTCACTTTTTTTTGGAACCTAAAACTTTACTTAGTTCAGTAATTTTGGATAGAAATATTTCTAAAAGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGGCATATATTTTTTATATCCTTAAATAGAAAATGCCACAATTCTTAGCATGAAGAATCCTTGCTGTTGACTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTATCAACCTTATAAACAATAAGTATTACAAGCCTCATGAGATATGTACATGGTTTGTCCTTATACCAGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCTAGACATCTGTTTCTAGAGTACCCAAGTGTGCTTTTAGTTACTTTCCAAATCATTGTTGTCAGTCAGATTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATCTTATTTCTTGTTTTTGTCAGTGCACCTTTGCATATTGCTTGCTCCTTTCTTTGATGCTTTTCAATTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTATCTTGAAAACCGATATTATTGTTTGAATTTGGGGCAAAGTAAGAGTAGCAGGGCTTTAATTACGCCCTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATGTCCCCTTAACTGTGGAAAACATCGAGTTTTATCTAGTTGGTGAATTTTTTTACTTCAGAATTTATTTTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTGTCATAAATTTTGCTAAGGATCTGCATTTTGAGTAGAATGAAGTGGCCAGATAGTTGAATAATGGTTTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAATATCTATATGTATATATGTATGTGTATGTGTGTTACACATACATATTTAATGACATGAAGTACTTTGGTTG 1184
Query 1 ------------------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGT 32
|..||||||||||||||||||.||||||||||
Sbjct 1185 CTTGGAATTGGACAGAAATAACAGTTTTTTTTTTTTTTTGGGACAGAGTCTTGCTCTGTCACCTAGGCTGGAGT 1258
Query 33 GCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGA 106
||||||||||||||||..|||||||||||.||..|.|.|||||||||||.||||||||||.|.||||||||.||
Sbjct 1259 GCAATGGCGCGATCTCTGCTCACTGCAACTTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCGCAGCCTCCCGA 1332
Query 107 GTAGCTGGGATTACAGG------------TGCCCACCACCACAGCTGGCTAA------TTTTTGTATTTTTAGT 162
||||||||||||.|||| |||||.|||.|||..|||||||| ||||||||||||||||
Sbjct 1333 GTAGCTGGGATTGCAGGCGCCTGCCAGCATGCCCGCCAGCACGCCTGGCTAATTTTTTTTTTTGTATTTTTAGT 1406
Query 163 AGAGACTGGGTTTTACCATATTGGCCAGACTGGTC-TCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCT 235
|||||..||||||.||.||.||||||||.|||||| |.||||||||||.||| |||.||.|..|||||||||.
Sbjct 1407 AGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCTTGGAACTCCTGATCTC--GTGATCTGTGTGCCTTGGCC 1478
Query 236 TCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA----------TT----------------- 282
|||||||||||||||||||.|||.|||||||||.||||||||||| ||
Sbjct 1479 TCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCAGAAATAACAGTTTTAATAAATTTCATGAA 1552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1553 ATCACTTTCTTGTATGTTAAAGGAAACAGAAAGGGTTCATTTGTGCATGGTTTAGTCTTTCTTTTGAATGTGGA 1626
Query 283 ------------------------------------------------------------ 282
Sbjct 1627 AGTTTTTCTTCTTATTTGTGTGTCTAAAAAAATTAAAAAGTGAAACATTTTCCAAAATGA 1686
