Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- XR_001749803.1
- Aligned Length:
- 2656
- Identities:
- 246
- Gaps:
- 2378
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCAGGAGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACGACACCCGGCCTAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCTTCTTTAAAGACAAATTTCCAGTGGGGCTCTGTAAGTAATCCTCATATTTTCTCGTTGAGGAGTGTGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAGAAGGTGAGTCTTCTGCACGTAGCAGGGGGGAAATGGTCAGGAGATACTGTAAAAGCACTAAGAAAACCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGAAAAGGCCAGGCTCCAGGAGCACAGAGACTGGATGGATTCCTGCTTCCCTGTCACTCGGCTCTGTTCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTGCAGTCACTTCCTTCACCTCAGTGTCCCTGTTTGTGCAAATGAGGTGACTATTGGTGCCGACCTACTTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGCAGTTTTGAAGAGAAGTGGCAAACGTTGAAGGGCGCACACTCTCCTTCCCCAAGCTCCCTCCCTCCCCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGTGCACCCAGAAGGAAATAAAAGCCGTAATTTGCACTGGCGAGTCGGCCCGCCTCGTCGAGGGTTCCGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGCTCACAAGGGCGTGCGGAGGCCCGCGGCCGGCCCTGGCCCCTGTGGTGGCAGCAGCTGGCTGGCTTCCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCGGCTACCTCCAGCTGCAGCTGTCGGTGCTATTTGCAGCTCTCCACATCCTGAGAGCTGGACGCCGAGGACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTCCCTGGAGGGCGTGCGTAAAATGCAGCAGCGGAGCGGTGAGGAGATTACCGGAAAAACTGGGAGCGGAGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCTCGTTCTGGAGCAGGGAGAGGCTTGGGAAGTTGCGAAACGTTGACCTGCAGGGTCTTGAGGAACTGTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTGGGCTGTCCCCGTGGGTCATTGAACATTAATCAGCCACCAGTCCTCGACCAAGCCAACCGAAATAGAGTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGGCAGAATGACGAATACAGTTTGAAAGGGAACGAACTTACTCTTATTCTCTCCTTGGAAAGGCCTTTCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTCTCGAACTCACCCCTGTCACATTACCCTGTTGTGTTATCTTTGTGGGCCTGCGCAGCACCTGAAATGATCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCTTAGAGATGGGGTCTCACTGTGTTGCCGAGGATGGAGTACAGTGGCTATTCACAGGCACAGTCATTGTGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTACATCCTGGAACTCCTGGGCTTAAGCAATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGACACAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCACCACACTCAGCAAAAGTGACAATTGTTTCTAATACAGACATCCACACCTGGACATACTGTGAAAATTATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCATTGGGCATATTAGTGTCCGTTCTTTCCAAGATCTGAGTTCATAATGTTTTCTTCTGTAATTGTAATGAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATCACCATTTCTTGCTAGCATTATACCAAATCCCTCTAGGCAACTGGGTAGCAGGCTATATGCCAACCTAGGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTGGAGATGACTTGTATCTTGTTTGCTATTAGAGCCAACATGTTAGAATTTGTGATTTGTCACAGAGTAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACGAGTTCACTCAAGAAGCACTTATTTATGAGCACCTACACAGGTGATAGAACAGTCAAAAGACAGGAGTTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCCTTCTGGAACTGACAATCTTACTAGAAAAATAAATGTTACCACATCACTTGAACAAAGGCACAATTATGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATTTGAGTTGTGTTTTGACTTCCTTCCCACTACCTTGTTTTTTTGTTTTTGTTTTTTGTTTGTTTTGTTTTGT 1702
Query 1 -------------------------ATGGAGTCTTGCTC-TGTCACCCAGGCTGGAGTGCAATGGCGCGATCTC 48
|||||||.|||||| |||||||||||||||||||..|||||.|||||||
Sbjct 1703 TTTTATGCTGGAGGTGTTGTGGGAGATGGAGTTTTGCTCTTGTCACCCAGGCTGGAGTGTGATGGCACGATCTC 1776
Query 49 CACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG 122
..|||||||||||||||||.|.|||||||||||.||||||||||.|.|||||||||||||||||||||||||||
Sbjct 1777 AGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCCCAGCCTCCTGAGTAGCTGGGATTACAG 1850
Query 123 GTGCCCA----CCACCACAGCTGGCTAA-TTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGA 191
| || |||||||..|.|||||| ||||||||||||.||||||||..||||||.|||||.||.|.|||.
Sbjct 1851 G----CATACGCCACCACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGATGGGGTTTCACCATGTTAGTCAGG 1920
Query 192 CTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGC 265
|||||||||||||||||||||||||||.||.||||||||..||||||||||||||||||||||.|||.||||||
Sbjct 1921 CTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGC 1994
Query 266 CACTGCGCCTGGCCATT--------------------------------------------------------- 282
||||||.||.||||..|
Sbjct 1995 CACTGCACCCGGCCCCTCCTTGCTGTCTTAATAGAAAGTGGAAAATAGAAATCTTCTGCACAAGGCCTTTGGTT 2068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2069 TGAATGCAACATGCCTAGAGATAGGGAACTGGAATCCAACACCGTTGCCTACAGATCTTTGGAGACTAAAAGAG 2142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2143 AAAAAATCCAGGAAAGAAAAAAAAAAAAACAAAAAACGGCTGCCATAGCTATTGGCCTCATTGGACAGGCCTGG 2216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2217 GTGATGTGCACAGACCCTAAAGGTGGCCGGAGCTGACCAGCTTCCTATTGCACTCTTCTGGGTGGCCCAGGCAC 2290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2291 CCAGTTGCATTGGCTGTGGCCACTGAGAAAGGATTGAGTCAGGCTGAGCCATGGGCAATGACAGAGGAGAGGGG 2364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2365 ATCAGCAGAGCCTACCTGAAAGCAAAGGAGAAATGGGTCGGTCACCTCATCGCAGAATTTACAGATGAAGGGGA 2438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2439 CAAACTTGTTACCTGAGGGTTTCCTTCATGCCTTGGAGTTTCTCTGAAAGAAAAGACAGCTGAGCATTTGCCCT 2512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2513 GTTTTTGTTTTACCATTTTTACACTTTCGAAGTCATGCCATCAAGTTTTAAGCTAGTAAGAGGACCATATACCG 2586
Query 283 ------------------------------------------------------------------ 282
Sbjct 2587 AATGGTACAATATCATAGTTCTTGTAGCAGCTACATTTTGATGAATAAAATTTCTTTTAAAATCTC 2652
