Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- XR_001755163.1
- Aligned Length:
- 2404
- Identities:
- 243
- Gaps:
- 2131
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGACGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGGTATTGCAGCACCGTGGGTGCGCCACCTCCTATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCATGTCCCACCTCCCACGCTAGAGGGCCGGCAAAGAAGCCAAGTGCCCATAGCCAGAGCCAGGCTTCTTCCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCTGAGTGGATTCCAGAGCTTCTGCCCTGTCCAGACGCAGCTGCAGGAACCAACACTATCATCCTGGTAGATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAA 1776
Query 1 -------------------------------------------------------ATGGAGTCTTGCTCTGTCA 19
|.|||||||||||||||||
Sbjct 1777 TTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCA 1850
Query 20 CCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGT 93
||||||||||||||||.||||.|||||||..||||||||||||||.||.|.|||.||||||||.|||||||||.
Sbjct 1851 CCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGC 1924
Query 94 CTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTA 160
|.|||||||||||.||||||||||||||| ||| |||||| ||| ||||||||||||.||||||
Sbjct 1925 CCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTG-CCACCATGCCCA------GCTAATTTTTGTGTTTTTA 1991
Query 161 GTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGC 234
||||||||.||||||.|||||.||||.|||.|||||||.|||||||||||.| ||||.|||.|||||||.|||
Sbjct 1992 GTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCCACCTGCCTCGGC 2063
Query 235 TTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGG---------CCATT----------------- 282
.|||||||||||||||||||.|||.|||||||||..||||||| |||.|
Sbjct 2064 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCA 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 GACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAG 2211
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2212 GAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATC 2285
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2286 TCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGC 2359
Query 283 ------------------------------------ 282
Sbjct 2360 TCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCA 2395
