Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- XR_001755164.1
- Aligned Length:
- 2266
- Identities:
- 243
- Gaps:
- 1993
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCGACCTGTGTCAGCAGAGCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAAAAACGCGTACAGGTAACCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTCATGCCACCCAAGCTGCTGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAGGACAGGGTCACTCAGTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGACGTGAAGACTCAGCCACAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCC 1628
Query 1 -----------------------------------------------------------------ATGGAGTCT 9
|.|||||||
Sbjct 1629 ACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCT 1702
Query 10 TGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCG 83
||||||||||||||||||||||||||.||||.|||||||..||||||||||||||.||.|.|||.||||||||.
Sbjct 1703 TGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCA 1776
Query 84 ATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACCA---CCACAGCTGGCTAATTTT 150
|||||||||.|.|||||||||||.||||||||||||||| ||| |||||| ||| |||||||||
Sbjct 1777 ATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTG-CCACCATGCCCA------GCTAATTTT 1843
Query 151 TGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGC 224
|||.||||||||||||||.||||||.|||||.||||.|||.|||||||.|||||||||||.| ||||.|||.|
Sbjct 1844 TGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCCAC 1915
Query 225 CTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGG---------CCATT------- 282
||||||.|||.|||||||||||||||||||.|||.|||||||||..||||||| |||.|
Sbjct 1916 CTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAA 1989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1990 CAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTG 2063
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2064 TGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGG 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 CAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCT 2211
Query 283 ---------------------------------------------- 282
Sbjct 2212 GAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCA 2257
