Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13840
Subject:
NR_135528.2
Aligned Length:
1789
Identities:
959
Gaps:
829

Alignment

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct    1  AAGCACACCCAGAGCTGCAGGCTCTAGCGCATCCCAGCCAGTGTCTCCTGCAGCTCAGCAGCTGCCTTCACCAT  74

Query    3  GGACAGCATAAGCACAGCCATCTTACTCCTGCTCCTGGCTCTCGTCTGTCTGCTCCTGACCCTAAGCTCAAGAG  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGACAGCATAAGCACAGCCATCTTACTCCTGCTCCTGGCTCTCGTCTGTCTGCTCCTGACCCTAAGCTCAAGAG  148

Query   77  ATAAGGGAAAGCTGCCTCCGGGACCCAGACCCCTCTCAATCCTGGGAAACCTGCTGCTGCTTTGCTCCCAAGAC  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATAAGGGAAAGCTGCCTCCGGGACCCAGACCCCTCTCAATCCTGGGAAACCTGCTGCTGCTTTGCTCCCAAGAC  222

Query  151  ATGCTGACTTCTCTCACTAAGCTGAGCAAGGAGTATGGCTCCATGTACACAGTGCACCTGGGACCCAGGCGGGT  224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGCTGACTTCTCTCACTAAGCTGAGCAAGGAGTATGGCTCCATGTACACAGTGCACCTGGGACCCAGGCGGGT  296

Query  225  GGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCTGGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGGTG  298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCTGGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGGTG  370

Query  299  ACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCATCGCCTTCTCCAGTGGGGATCGATGGAAGGTCCTG  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCATCGCCTTCTCCAGTGGGGATCGATGGAAGGTCCTG  444

Query  373  AGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATGGGGAAGAGAAGCATTGAGGAGCGAATCCTAGAGGA  446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATGGGGAAGAGAAGCATTGAGGAGCGAATCCTAGAGGA  518

Query  447  GGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGGCGAGCCCTTTGACCCCACGTTTGTGCTGAGTCGCT  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGGCGAGCCCTTTGACCCCACGTTTGTGCTGAGTCGCT  592

Query  521  CAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCCGCTTCGACTATGATGATGAGCGTCTGCTCACCATT  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCCGCTTCGACTATGATGATGAGCGTCTGCTCACCATT  666

Query  595  ATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGCCCCTGGGGCGAGTTGTACGACATCTTCCCGAGCCT  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGCCCCTGGGGCGAGTTGTACGACATCTTCCCGAGCCT  740

Query  669  CCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCAGAACTTCAAGTGCCTGAGAGACCTCATCGCCCACA  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCAGAACTTCAAGTGCCTGAGAGACCTCATCGCCCACA  814

Query  743  GCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTCCCCGGGACTTCATCCAGTGCTTCCTCACCAAGATG  816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTCCCCGGGACTTCATCCAGTGCTTCCTCACCAAGATG  888

Query  817  GCAGAGGAGAAGGAGGACCCACTGAGGCACTTCCACATGGATACCCTGCTGATGACCACACATAACCTGCTCTT  890
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCAGAGGAGAAGGAGGACCCACTGAGCCACTTCCACATGGATACCCTGCTGATGACCACACATAACCTGCTCTT  962

Query  891  TGGCGGCACCAAGACGCCCGCGTGCAGGAGGAGATCGACCTCGTGGTGGGACGCGCGCGGCTGCCGGCGC----  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  963  TGGCGGCACCAAGACGCCCGCGTGCAGGAGGAGATCGACCTCGTGGTGGGACGCGCGCGGCTGCCGGCGCTGAA  1036

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1037  GGACCGCGCGGCCATGCCTTACACAGACGCGGTGATCCACGAGGTGCAGCGCTTTGCAGACATCATCCCCATGA  1110

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1111  ACTTGCCGCACCGCGTCACTAGGGACACGGCCTTTCGCGGCTTCCTGATACCCAAGGGCACCGATGTCATCACC  1184

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1185  CTCCTTAACACCGTCCACTACGACCCCAGCCAGTTCCTGACGCCCCAGGAGTTCAACCCCGAGCATTTTTTGGA  1258

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1259  TGCCAATCAGTCCTTCAAGAAGAGTCCAGCCTTCATGCCCTTCTCAGCTGGGCGCCGTCTGTGCCTGGGAGAGT  1332

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1333  CGCTGGCGCGCATGGAGCTCTTTCTGTACCTCACCGCCATCCTGCAGAGCTTTTCGCTGCAGCCGCTGGGTGCG  1406

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1407  CCCGAGGACATCGACCTGACCCCACTCAGCTCAGGTCTTGGCAATTTGCCGCGGCCTTTCCAGCTGTGCCTGCG  1480

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1481  CCCGCGCTAACGCCCCGGCCCTTCCAGATTCGCCTGTGAGCGATGAGGCCCGCCCATGCGGGTTGCTACGTCCC  1554

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1555  CTTCTTGGTCCACAGTCTGCCCTCATCCCTCTGGCAGTCACGCTGTCTTCCCTGCATGCTGTGCCTGCCGCGTG  1628

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1629  CCCTTCCCCCATCCCTCCAATCTGTGCCCCGTCTGCAGGGCAGAGGCAGATGTGGCATGTCTTTTTGTACCCAC  1702

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1703  AGAGCTTGTTCTATGGCACGCCCTTTTCTAGGCTTTTTGTATCATTTCTTAGTACATTGTAATAGATTCAAACC  1776

Query  961  -------------  960
                         
Sbjct 1777  AGTCTTGGCTGAA  1789

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