Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13840
- Subject:
- XR_430190.3
- Aligned Length:
- 1824
- Identities:
- 959
- Gaps:
- 864
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAAAGAAAGGAAGGAAGGAAGGAAAGAAAGAGTGATAGATGATAGATGGCTGATAGGTAGACAGACATCTGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATATGTAGATCGCTCACTGTTTTTCTGTCTCTCTCATTATCTTTATGCATATCTCTTGGCCTCTCTTAGTCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTTCCTCTATCACTTGCCTCTCTCCATTTATGTCTCTGTGTTTCTGTCTCCTTATCTGTCTATATGTTGACTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCTGCCTCTTTCCTCCTTTCTCCCTCCCTTCCCCATCCCCTGGCCTCTCCCTGTCTCCTTCTCTCCATCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCATTTCCAGGGCCTAGGGAAGGTAAGTCCCAGGGGAGATGGAAAGGAGGGATCAGCGATGTCCTCTCCCAC 370
Query 1 ---------------------------------ATGGACAGCATAAGCACAGCCATCTTACTCCTGCTCCTGGC 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTTGCCCTCCACACGCCAGCAGCTGCCTTCACCATGGACAGCATAAGCACAGCCATCTTACTCCTGCTCCTGGC 444
Query 42 TCTCGTCTGTCTGCTCCTGACCCTAAGCTCAAGAGATAAGGGAAAGCTGCCTCCGGGACCCAGACCCCTCTCAA 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTCGTCTGTCTGCTCCTGACCCTAAGCTCAAGAGATAAGGGAAAGCTGCCTCCGGGACCCAGACCCCTCTCAA 518
Query 116 TCCTGGGAAACCTGCTGCTGCTTTGCTCCCAAGACATGCTGACTTCTCTCACTAAGCTGAGCAAGGAGTATGGC 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCCTGGGAAACCTGCTGCTGCTTTGCTCCCAAGACATGCTGACTTCTCTCACTAAGCTGAGCAAGGAGTATGGC 592
Query 190 TCCATGTACACAGTGCACCTGGGACCCAGGCGGGTGGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCT 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCATGTACACAGTGCACCTGGGACCCAGGCGGGTGGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCT 666
Query 264 GGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGGTGACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCA 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGGTGACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCA 740
Query 338 TCGCCTTCTCCAGTGGGGATCGATGGAAGGTCCTGAGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCGCCTTCTCCAGTGGGGATCGATGGAAGGTCCTGAGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATG 814
Query 412 GGGAAGAGAAGCATTGAGGAGCGAATCCTAGAGGAGGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGG 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGGAAGAGAAGCATTGAGGAGCGAATCCTAGAGGAGGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGG 888
Query 486 CGAGCCCTTTGACCCCACGTTTGTGCTGAGTCGCTCAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCC 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGAGCCCTTTGACCCCACGTTTGTGCTGAGTCGCTCAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCC 962
Query 560 GCTTCGACTATGATGATGAGCGTCTGCTCACCATTATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGC 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTTCGACTATGATGATGAGCGTCTGCTCACCATTATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGC 1036
Query 634 CCCTGGGGCGAGTTGTACGACATCTTCCCGAGCCTCCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCA 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCTGGGGCGAGTTGTACGACATCTTCCCGAGCCTCCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCA 1110
Query 708 GAACTTCAAGTGCCTGAGAGACCTCATCGCCCACAGCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTC 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAACTTCAAGTGCCTGAGAGACCTCATCGCCCACAGCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTC 1184
Query 782 CCCGGGACTTCATCCAGTGCTTCCTCACCAAGATGGCAGAGGAGAAGGAGGACCCACTGAGGCACTTCCACATG 855
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1185 CCCGGGACTTCATCCAGTGCTTCCTCACCAAGATGGCAGAGGAGAAGGAGGACCCACTGAGCCACTTCCACATG 1258
Query 856 GATACCCTGCTGATGACCACACATAACCTGCTCTTTGGCGGCACCAAGACGCCCGCGTGCAGGAGGAGATCGAC 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GATACCCTGCTGATGACCACACATAACCTGCTCTTTGGCGGCACCAAGACGCCCGCGTGCAGGAGGAGATCGAC 1332
Query 930 CTCGTGGTGGGACGCGCGCGGCTGCCGGCGC------------------------------------------- 960
|||||||||||||||||||||||||||||||
Sbjct 1333 CTCGTGGTGGGACGCGCGCGGCTGCCGGCGCTGAAGGACCGCGCGGCCATGCCTTACACAGACGCGGTGATCCA 1406
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1407 CGAGGTGCAGCGCTTTGCAGACATCATCCCCATGAACTTGCCGCACCGCGTCACTAGGGACACGGCCTTTCGCG 1480
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1481 GCTTCCTGATACCCAAGGGCACCGATGTCATCACCCTCCTTAACACCGTCCACTACGACCCCAGCCAGTTCCTG 1554
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1555 ACGCCCCAGGAGTTCAACCCCGAGCATTTTTTGGATGCCAATCAGTCCTTCAAGAAGAGTCCAGCCTTCATGCC 1628
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1629 CTTCTCAGCTGGTGAGGGCAGGAATCAGAGTCTTTCTGGCCCAATTTCTACCTACATTCCTCACCCTAATTCCA 1702
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1703 CTTGCCAAATCCTCTCACTCCTTCCTTCCACCCATTCTCAGCTTTGGATGCACAGAGACATTCATTCCTCCTCT 1776
Query 961 ------------------------------------------------ 960
Sbjct 1777 CAACTCTGCTCCTATAGGCAAGTAGTGACTAAAATCCTCGTGAAGCAA 1824
