Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13846
Subject:
NR_144476.1
Aligned Length:
2602
Identities:
1088
Gaps:
1513

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGCGCTCTCCGCGTTCTTCCAGCGCTGTCTTTTTAGTACCACATGCGCAGGCAGGTGATGGCGGCGCTGGTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATCCGGGGCAGCGGAGCAGGGCGGCCGAGACGGCCCTGGCAGAGGTCGGGCCCCTCGGGGCCGCGTGGCCAAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATCCCCCCTGAGATCCTGAAGAACCCTCAGCTGCAGGCAGCAATCCGGGTCCTGCCTTCCAACTACAACTT  222

Query    1  -------------------------------------------------------------ATGCCGGAAGGCC  13
                                                                         |||||||||||||
Sbjct  223  TGAGATCCCCAAGACCATCTGGAGGATCCAACAAGCCCAGGCCAAGAAGGTGGCCTTGCAAATGCCGGAAGGCC  296

Query   14  TCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGTGATGGTGATGGGTGAC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGTGATGGTGATGGGTGAC  370

Query   88  GTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACTTCTTGGTGCACTACGG  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACTTCTTGGTGCACTACGG  444

Query  162  CCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTCTTTGTGGACATCCGGA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTCTTTGTGGACATCCGGA  518

Query  236  TAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCACTGCCCTTGCCCTGGTCAGCACC  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCACTGCCCTTGCCCTGGTCAGCACC  592

Query  310  ATTCAGTTTGTGTCGACCTTGCAGGCAGCCGCCCAGGAGCTGAAAGCCGAGTATCGTGTGAGTGTCCCACAGTG  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATTCAGTTTGTGTCGACCTTGCAGGCAGCCGCCCAGGAGCTGAAAGCCGAGTATCGTGTGAGTGTCCCACAGTG  666

Query  384  CAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGAGGTGGAGGCCGTTGT--  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct  667  CAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGAGGTGGAGGCCGTTGTGT  740

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  741  AAGTTAAAAATGGGGGCCAAGTAAGTCCTAGAGACATGCGTGTACCCTGGGAGGGAGCCTGAGGTTCATCATCC  814

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  815  AGGAAAGAAACCAAATCTAATGCTCCTTACCTGTGAGCCCGAGGTCACACTGCAAGGTAGGGACCAAACAGGGA  888

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  889  GCAGACCTCAGGTTTACTGTCGCTTTCTCCACTGCCCAGTCCATCATCCAGAAGGCTGTGCAGGGTGGGGGCAG  962

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  963  GAATCAGAGGGCCTGATGGGGGTTGAGGGTGGGCTGGAAATGGTGGGAATATAATTGGAGAAGATGGATGGGCA  1036

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct 1037  CGCCCAGGCTGCAGCCCCATTAATTTACCATCCGGACAGCTAACAAGCAGAAGCAGCGTGTCTCCTGCCGCCTA  1110

Query  456  ----------GTATCTTGGAGATGGCCGCTTCCATCTGGAGTCTGTCATGATTGCCAACCCCAATGTCCCCGCT  519
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATTATTTTAGGTATCTTGGAGATGGCCGCTTCCATCTGGAGTCTGTCATGATTGCCAACCCCAATGTCCCCGCT  1184

Query  520  TACCGGTATGACCCATATAGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCATGCAGGCTGCTCGCCA  593
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TACCGGTATGACCCATATAGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCATGCAGGCTGCTCGCCA  1258

Query  594  AGAAGCCATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCAGTC  667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGAAGCCATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGGCAGTC  1332

Query  668  CTAAGATCCTGGAGCACCTGGAATCTCGACTCCGAGCCTTGGGCCTTTCCTTTGTGAGGCTGCTGCTCTCTGAG  741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTAAGATCCTGGAGCACCTGGAATCTCGACTCCGAGCCTTGGGCCTTTCCTTTGTGAGGCTGCTGCTCTCTGAG  1406

Query  742  ATCTTCCCCAGCAAGCTTAGCCTACTTCCCGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGTCTCTCCAT  815
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ATCTTCCCCAGCAAGCTTAGCCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGTCTCTCCAT  1480

Query  816  TGACTGGGGCACAGCCTTCCCCAAGCCGCTGCTGACACCCTATGAGGCGGCCGTGGCTCTGAGGGACATTTCCT  889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGACTGGGGCACAGCCTTCCCCAAGCCGCTGCTGACACCCTATGAGGCGGCCGTGGCTCTGAGGGACATTTCCT  1554

Query  890  GGCAGCAGCCCTACCCGATGGACTTCTACGCTGGCAGCTCCTTGGGGCCCTGGACGGTGAACCACGGCCAGGAC  963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGCAGCAGCCCTACCCGATGGACTTCTACGCTGGCAGCTCCTTGGGGCCCTGGACGGTGAACCACGGCCAGGAC  1628

Query  964  CGCCGTCCCCACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTGCAGGAGGGGTCCGCGCGTCCCCCTTCGGCCGT  1037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CGCCGTCCCCACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTGCAGGAGGGGTCCGCGCGTCCCCCTTCGGCCGT  1702

Query 1038  GGCTTGCGAGGACTGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTGGCTCCT----------------------  1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1703  GGCTTGCGAGGACTGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTGGCTCCTTGACGCGCTCCCGGGCCTCAGG  1776

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1777  GTCCTGCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCAGAGCAGGAGGCCGACGTTTTCTCCGCATTGG  1850

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1851  AAGAGCCCGCCGTCTGCAGGGGCCTGGAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGGCCT  1924

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1925  TTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGA  1998

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 1999  TCCCCGCTTCCCCTTGCCACGGTTTATCCTCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTCAAGGAAT  2072

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2073  CCATCCTGCAAAGGCCCTTGTCATTGCCTTCGCTCCATGTTTTTGGGGACACTGACAAAGTCATCCCCTCTCAG  2146

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2147  GAGAGTGTGCAACTGGCCAGCCAATTTCCCGGAGCCATCACCCTCACCCACTCTGGTGGCCACTTCATTCCAGC  2220

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2221  AGCTGCACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACCAGTTTGCAGAGTGAAAGATCAAGAAATGTCTCT  2294

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2295  GCTCCTACATCCAGCTCCTCTAGGGGCAGCCTCCGTCATCCATGCCCTCCCAGGACCCTCCACTCACTGCTGTG  2368

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2369  AGTGCGCCTCACCAGAACCAGTTAAGAGACAACTATCAATTCTTGAGACCCAAATTATAAGGGCCCTGCCCTGT  2442

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2443  ACTGAAGAAAAGGGGAGCACAAGGCCTTAATGGACATTGACTTGTGAAAACGCAAACATGAATATGGTTGGAGA  2516

Query 1090  --------------------------------------------------------------------------  1089
                                                                                      
Sbjct 2517  GCCCTGGATTAGGAGGGTGACATGGGGAAGGCAGAGGCTGGCACCATGGTGACTGCCACATAATAAAGTGGTGA  2590

Query 1090  ------------  1089
                        
Sbjct 2591  TTTGGATTTTGA  2602

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